Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0875 ATGACGAGCTACGCGTTTCTGAACGATCAGCTCTCAAAGCATACCTCAATTTTTGGGTTACGACTGTGGGTGGTGCTGGGCATATGCGTCGGAGCAGCCATTGTCATTTTACTGTTTATCATATCACTCTGGTTCGCTGCAAAACGCAATAACGCTTCCAAGCTCAAGTCTTGTCAGAAACCCAACATCAACATACCGAATGTGTCCAAGGAGATTCAGGAAATCTGGGTTGACCATTCTCATGAACCAGCCAAGCCAAACATTGTGCCCAACCCCGACCCATTGCCGGAATCACAGTCCGAGGCTCTAGAAAGAGCCCAAGCCATTCTTCTTCAGCAGGAGGACGAAAGCCCAGTAACAGGGCCCCGCAAAATTCACATTGAAATTGGAAAGGGCCACAGGATTTCGTACCCTGAGAGGGTTGGAGGTTCATCGCATGGCAGCGGGGAGGTTCGATCCGGTGAGCAAGCCTCCATTGCTGTGCCGGAAGTTTCTCATTTGGGTTGGGGGCATTGGTACACTCTTCGAGAGCTCGAGGTCTCCACCAATTTTTTCGCCGATGAGAACGTCATAGGTGAAGGTGGCTACGGAATTGTTTACCGAGGAGTGTTGCAAGATAATACCAATGTTGCTGTTAAAAATTTGCTCAATAATAAGGGTCAAGCTGAGAGGGAATTCGAGATGGAAGTTCAAGCAATTGGACGAGTGCGGCATAAAAATTTGGTGAGGTTGCTTGGATATTGTGTTGAAGGAGCACACAGGATGCTTGTTTATGAGTATGTGGACAATGGAAATCTAGAACAATGGCTACATAGAGATACCGGCCCTTCTAGCCCCCTGACGTGGGATATTCGAATGAATATAATACTAGGAACTGCAAAAGGGTTGACATACCTTCATGAGGGGCTTGAGCCGAAGGTTGTTCATCGTGATATCAAGTCTAGCAATATATTGCTTGATAAGCGATGGGATCCGAAAGTATCTGATTTTGGGCTTGCAAAACTCTTGGGATCCGAAAGGAGTTATGTGACGACTCGCGTAATGGGAACATTTGGATATGTGGCGCCAGAATATGCAAGCACTGGCATGTTAAACGAAAGAAGCGACGTTTATAGCTTTGGGGTTCTTCTTATGGAGATAATTTGTGGTAGAAACCCAGTTGATTATAGCCGTCCTCAAGGAGAGGTCAACCTGGCTGAGTGGCTGAAGACAATGGTTACAAACCGAAATGCAGAAGGTGTGCTGGATCCTAGGCTTCCTGAGAAACCTTCTTCTAGAGCACTGAAGCGTGCCTTATTAGTAGCGTTACGCTGTGTAGATCCAAATGTCCAGAAAAGGCCAAAGATGGGACATGTTATACATATGCTCGAAGCTGATCAGTTCCCATTTCGAGATGACCGTAGGGCTGGAAGGGAATATGGACGGTCCCATCAGGATAACACGAGAGATAGGATGATGGAAAAGCGAGTAAGCGAATCCGGTGACAGTAGTGCGTATGAAAGTAGTTCCCACACTAAATAG 1521 0.4675 MTSYAFLNDQLSKHTSIFGLRLWVVLGICVGAAIVILLFIISLWFAAKRNNASKLKSCQKPNINIPNVSKEIQEIWVDHSHEPAKPNIVPNPDPLPESQSEALERAQAILLQQEDESPVTGPRKIHIEIGKGHRISYPERVGGSSHGSGEVRSGEQASIAVPEVSHLGWGHWYTLRELEVSTNFFADENVIGEGGYGIVYRGVLQDNTNVAVKNLLNNKGQAEREFEMEVQAIGRVRHKNLVRLLGYCVEGAHRMLVYEYVDNGNLEQWLHRDTGPSSPLTWDIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKRWDPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGVLLMEIICGRNPVDYSRPQGEVNLAEWLKTMVTNRNAEGVLDPRLPEKPSSRALKRALLVALRCVDPNVQKRPKMGHVIHMLEADQFPFRDDRRAGREYGRSHQDNTRDRMMEKRVSESGDSSAYESSSHTK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0875 506 PANTHER OS01G0323000 PROTEIN 1 489 - -
Lele25g0875 506 Gene3D Transferase(Phosphotransferase) domain 1 261 469 - -
Lele25g0875 506 FunFam Probable serine/threonine-protein kinase At1g01540 165 260 - -
Lele25g0875 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Lele25g0875 506 SUPERFAMILY Protein kinase-like (PK-like) 166 457 IPR011009 -
Lele25g0875 506 FunFam Putative receptor-like serine/threonine-protein kinase 261 471 - -
Lele25g0875 506 Pfam Protein kinase domain 186 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0875 506 SMART serkin_6 185 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0875 506 MobiDBLite consensus disorder prediction 467 506 - -
Lele25g0875 506 ProSitePatterns Protein kinases ATP-binding region signature. 191 213 IPR017441 GO:0005524
Lele25g0875 506 MobiDBLite consensus disorder prediction 467 494 - -
Lele25g0875 506 ProSiteProfiles Protein kinase domain profile. 185 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0875 506 CDD STKc_IRAK 191 457 - -
Lele25g0875 506 Gene3D Phosphorylase Kinase; domain 1 152 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0875 Lele-ChrLele25 5600810 5603074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0875 130 499 Trihelix Transcription Factor Family AT1G70460 42.257 5.19e-88 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele25g0875 Pkinase 4.1e-48 CL0016