Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0866 ATGGGAAGCATGAAGGTGCATCACTTGGCACGTGCACTCTGGGAGCACGAATCCTCTCCCTGCCTCTCCCTCGGCTGCAAAAGCCTTCGCCCTCTCGTCCCCAAGCTCCCCACCTCTCCCAGTACTCCTCTCCCCTCCTTCGACCTCAAAACCTTCATCCACCCTGAAAGTGGCCCCCGAAAACCATCCGACGACTTTCACAAAGATTCACCACCCAAGGTGGAAACACATCCGGGAGGGACGAGATGGAATCCGACGCAGGAGCAGATAGGGATATTGGAGATGCTGTACCGAGGAGGGATGCGAACGCCGAATGCTGAGCAGATAGAGCAGATCACTGCTCAACTTGGCAAGTATGGCAAGATTGAAGGCAAGAATGTCTTCTATTGGTTCCAAAACCACAAAGCACGTGAGAGGCAAAAGCAGAAACGCAACAGTCTCGGTCTCTCTCATCACAGTCCCAGATCTACTACTACTACTATGACTTTTGACGCAAGGCTGGGTGAAGTAGTAGGGACGACTGAGGAGCATAGTCCGTACAAGAAGAAGTGCAGGAATTGGGCATTTGAGAGCTTCCAAGAACAAAGCAGGCCGTCGTCGTGTAAAGAGGAACAACAACACACAACTCTGGAGCTTTTCCCGTTGCACCCGGAAGGCAGATGA 663 0.5249 MGSMKVHHLARALWEHESSPCLSLGCKSLRPLVPKLPTSPSTPLPSFDLKTFIHPESGPRKPSDDFHKDSPPKVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAEQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHHSPRSTTTTMTFDARLGEVVGTTEEHSPYKKKCRNWAFESFQEQSRPSSCKEEQQHTTLELFPLHPEGR 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0866 220 MobiDBLite consensus disorder prediction 54 75 - -
Lele25g0866 220 Gene3D - 80 147 - -
Lele25g0866 220 MobiDBLite consensus disorder prediction 139 158 - -
Lele25g0866 220 MobiDBLite consensus disorder prediction 37 85 - -
Lele25g0866 220 ProSiteProfiles 'Homeobox' domain profile. 76 141 IPR001356 GO:0003677
Lele25g0866 220 MobiDBLite consensus disorder prediction 195 220 - -
Lele25g0866 220 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 220 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Lele25g0866 220 CDD homeodomain 81 142 IPR001356 GO:0003677
Lele25g0866 220 SUPERFAMILY Homeodomain-like 76 146 IPR009057 -
Lele25g0866 220 SMART HOX_1 78 145 IPR001356 GO:0003677
Lele25g0866 220 FunFam WUSCHEL-related homeobox 4 80 147 - -
Lele25g0866 220 Pfam Homeodomain 81 140 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0866 Lele-ChrLele25 5562226 5563108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0866 4 164 Wox Gene Family AT1G46480 62.857 5.45e-63 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele25g0866 Homeodomain 4.3e-19 CL0123