Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0849 ATGGCTCATCATCAGCATCCACTAGACAACCCCAGGTTCCATTTGGATGTCCTGTACTGTTCGGAGGAGCATTGGGAGGAACAAACGGGCCTCGACTATTTCCACCACGAATTAGAACAAGTAGACGAGTCTTATCTTGGCTGTGATGCTCAGACAAAGCTGCCTCCGGTGTTGCTCGAACAGGACCTCTTCTGGGATGACGAGGAGCTCACGTCTCTGCTGGCCAAAGAACGTGAAAACCAACTCCATACGTTACTGGAAACCAGCCCTCTTCTCTCCATAGCTCGCAGAGAAGGAGTAGAGTGGATTCTGAAAGTGAATTCCCACTACTCTTTCTCTGTTCTCACCGCTGTTCTTGCCGTAAACTACCTCGACAGGTTCCTGTTCCACTTTCAAGTTCAGGATGGAAAGCCCTGGATGACCCATCTTGCTGCCGTCGCTTGTCTTTCCCTCGCCGCCAAGGTGGAGGAGACCCACGTCCCGCTTTTACTCGACCTCCAAGTGGAGGACAGCAGATACGTGTTCGAAGCCAAAACCATAAAAAGGATGGAGATTTTGGTGCTTTCCACTCTTGAGTGGAAAATGAATCCGGTGACACCACTATCGTTTCTCGATTACATCACTCGGAGGCTGGGCTTAAGGGATTATCTCTACTGGGAATTTCTCAGGAGGTGCCAAGGCATTATTCTGTCCGTCATTGCAGATTCGAGGTTTATGTGTTATCTTCCTTCTGTGGTGGCGACTGCGACAATTATGCACGTGGTGAATGGTGTGGAAGCCGGCCTAGGAATGGAGTACAGAAACCAGCTACTGGGTATTCTGGGAATCGACAAGGACAAGGTGGAGGAGTGCCACAAGCTCGTAATGGAATTTACAACAGAGTGGAGAGTGAAGCAATCCAACAAGCGGACGTTTGGTTCCGTTCCCGGAAGTCCAAACGGCGTGATGGATGCGTCGTTCAGCTGCGACAGCTCCAACGATTCGTGGGCCGTGGCTGCTTCTGTTTCATCATCGCCTGATCCTCTGTCCAAGAAGGCCAGGACTCAAGAACATCTTGTAGACCATCCCAATTCAGAATTCCTCAGTATTCCTCCATGA 1098 0.5036 MAHHQHPLDNPRFHLDVLYCSEEHWEEQTGLDYFHHELEQVDESYLGCDAQTKLPPVLLEQDLFWDDEELTSLLAKERENQLHTLLETSPLLSIARREGVEWILKVNSHYSFSVLTAVLAVNYLDRFLFHFQVQDGKPWMTHLAAVACLSLAAKVEETHVPLLLDLQVEDSRYVFEAKTIKRMEILVLSTLEWKMNPVTPLSFLDYITRRLGLRDYLYWEFLRRCQGIILSVIADSRFMCYLPSVVATATIMHVVNGVEAGLGMEYRNQLLGILGIDKDKVEECHKLVMEFTTEWRVKQSNKRTFGSVPGSPNGVMDASFSCDSSNDSWAVAASVSSSPDPLSKKARTQEHLVDHPNSEFLSIPP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0849 365 Pfam Cyclin, C-terminal domain 198 305 IPR004367 -
Lele25g0849 365 CDD CYCLIN 96 188 IPR013763 -
Lele25g0849 365 SMART cyclin_7 101 189 IPR013763 -
Lele25g0849 365 MobiDBLite consensus disorder prediction 336 365 - -
Lele25g0849 365 SUPERFAMILY Cyclin-like 181 298 IPR036915 -
Lele25g0849 365 Gene3D - 197 286 - -
Lele25g0849 365 PANTHER CYCLINS 73 290 IPR039361 -
Lele25g0849 365 SMART Cyclin_C_2 198 324 IPR004367 -
Lele25g0849 365 SUPERFAMILY Cyclin-like 64 196 IPR036915 -
Lele25g0849 365 Gene3D - 91 196 - -
Lele25g0849 365 FunFam D6-type cyclin 79 196 - -
Lele25g0849 365 Pfam Cyclin, N-terminal domain 86 196 IPR006671 -
Lele25g0849 365 FunFam CYCLIN D32 197 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0849 Lele-ChrLele25 5461368 5462739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0849 13 303 Core Cell Cycle Gene Families AT4G34160 50.000 8.95e-98 293