Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0846 ATGGCTTCCCTCAACAAAGACATCGATCGTATTAAAGGCCCGTGGAGTCCCGAGGAAGATGAAGCCTTGCAGGGACTCGTCCATATTTACGGTCCCAGAAACTGGTCTCTAATCAGCAAGTCCATTCCCGGTCGATCCGGCAAGTCCTGCCGTTTGCGGTGGTGCAACCAGCTCTCTCCCAGCGTCGAGCACCGGCCTTTCACTCCCGAGGAGGACGAAACCATCATCAGAGCACACGCCAGGTTCGGCAACAAGTGGGCCACAATCGCTCGCTTGCTCCACGGTCGCACCGACAACGCCATCAAAAACCACTGGAATTCCACTCTAAAGAGGAAATGCTCCGCCATCACCGATCCTTTCGATCCCGAATCCAATGACCACCAGCCTCTTAAAAGATCTGCCAGTGTCGGTGCCGCCCCGACCGTCTCCGGATTGTACTTGAGCCCGAGCAGCCCATCTGGATCCGATTTGAGCGACACCAGTTTGCCCGCCATGTCTCCCACGCGGGTTTTCAGACCCTTTGCCAGGAACGCCGCCCCCGTCCCCGTCCCCGTCCCCTGCTCACCACAACCGGAAACCGCAACTTCCCCCCACGATCCACCGACATCACTATGCCTATCACTGCCTGGATCCAATTCGCACGACTCCTCCAACCACGTATCCGGATCGAATCAGCCTGTCAGCCCGACACAGTTACCGCCAAGTCCACCATCGCCAGCGCCTGCCGCACCAGCTGTAGGAGCATCAATACGGCAAGTGCGTTTTCGGGCTCCTACCGATCAGGGATATGATCAGTTTGGTTGGGAGAAACAATTCTTCAGCACCGAGTTTTTGGCGGTGATGCAAGATATGATAAAGAAGGAAGTGAGGAATTACATGTCTGGGATGGAGCCGAACGGTCTGTGTATTCAGACGGAAGCCATTAGGAACGCCGTGGTGAAGAGTATCGGTATGGGCAGAGTCGAGTAA 969 0.5593 MASLNKDIDRIKGPWSPEEDEALQGLVHIYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPSVEHRPFTPEEDETIIRAHARFGNKWATIARLLHGRTDNAIKNHWNSTLKRKCSAITDPFDPESNDHQPLKRSASVGAAPTVSGLYLSPSSPSGSDLSDTSLPAMSPTRVFRPFARNAAPVPVPVPCSPQPETATSPHDPPTSLCLSLPGSNSHDSSNHVSGSNQPVSPTQLPPSPPSPAPAAPAVGASIRQVRFRAPTDQGYDQFGWEKQFFSTEFLAVMQDMIKKEVRNYMSGMEPNGLCIQTEAIRNAVVKSIGMGRVE 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0846 322 MobiDBLite consensus disorder prediction 197 228 - -
Lele25g0846 322 MobiDBLite consensus disorder prediction 145 164 - -
Lele25g0846 322 MobiDBLite consensus disorder prediction 229 243 - -
Lele25g0846 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 113 IPR017930 -
Lele25g0846 322 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Lele25g0846 322 CDD SANT 14 56 IPR001005 -
Lele25g0846 322 ProSiteProfiles Myb-like domain profile. 7 58 IPR001005 -
Lele25g0846 322 MobiDBLite consensus disorder prediction 183 246 - -
Lele25g0846 322 FunFam MYB transcription factor 12 63 - -
Lele25g0846 322 Gene3D - 11 63 - -
Lele25g0846 322 PANTHER MYB PROTEIN-RELATED 12 212 - -
Lele25g0846 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 62 IPR017930 -
Lele25g0846 322 FunFam Transcription factor MYB44 66 112 - -
Lele25g0846 322 CDD SANT 66 109 IPR001005 -
Lele25g0846 322 Pfam Myb-like DNA-binding domain 12 58 IPR001005 -
Lele25g0846 322 Pfam Myb-like DNA-binding domain 66 108 IPR001005 -
Lele25g0846 322 Gene3D - 65 135 - -
Lele25g0846 322 SMART sant 11 60 IPR001005 -
Lele25g0846 322 SMART sant 63 111 IPR001005 -
Lele25g0846 322 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Lele25g0846 322 MobiDBLite consensus disorder prediction 116 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0846 Lele-ChrLele25 5432656 5433624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0846 9 322 MYB Transcription Factor Family AT5G67300 52.484 4.82e-96 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele25g0846 Myb_DNA-binding 8e-16 CL0123