Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0837 ATGAACTCTCTGTCACGAGAAGATGAATCCCCAGAAGACGTCAAGAACGAAGACGTCAACCGCTTGCTTCAACCCCAATCTGAATCCCGGCCTTTGTCTTTGGACGACGAAGAGGCCGCTTACGAGGCAGGGGAGAAAATTCTCATAGCAGATTTAGACTCTATCGACGATAAGGATTCGACGACGGTGCCGGCTTTCTCGTGGAAGAAGCTATGGCTATTCACGGGACCGGGTTTCTTGATGAGCATAGCTTTTTTGGATCCGGGAAATCTCGAAGGAGATCTCCAGTCTGGAGCCATCGCCGGCTACTCCCTGCTCTGGCTATTGATGTGGGCCACAATTATGGGCTTGTTGATTCAGCTTCTTTCCGCAAGGATCGGGGTGGTCACTGGTCGGCACCTGGCAGAGCTGTGCAGAGACGAATATCCTAATTGGGCAAGGTTAGTGCTGTGGTTCATGGCCGAGTTGGCCTTGATTGGTGCTGACATTCAAGAGGTCATTGGGAGTGCCATCGCGATACAAATTCTTAGCCACGGGGTGTTGCCGCTTTGGGCTGGAGTCGTGATTACTGCTTCCGATTGTTTTTTCTTTTTATTTCTTGAGAATTATGGAGTAAGGAAGCTGGAAGCTGTTTTTGCAGTTCTCATCGGGACAATGGCCCTTTCTTTTGCCTGGATGTTTGGTGACGCCAAACCTAGTGGAAGAGAACTCTTGATGGGTATTTTAGTTCCAAGACTTAGCTCAAAAACAATTCGCCAGGCTGTGGGGGTTGTGGGTTGCGTCATAATGCCTCACAACGTGTTCTTGCATTCTGCTTTGGTGCAGTCAAGGGAAATTGATACCCATAATAAAGGCCACGTGCAGGAGGCTCTTAACTACTATACCATTGAGTCAACAGTTGCTCTTTCAGTCTCCTTCATCATTAACCTATTCGTCACAACAGTTTTTGCTAAGGGGTTTTACAGTTCAAAGCAGGCCAATAGCATAGGATTGGTTAATGCAGGGCAGTATCTTCAGGAAAAGTATGGAGGAGGGCTCTTCCCAATTCTTTATATATGGGGTATTGGGTTATTGGCAGCTGGGCAGAGTAGCACCATTACTGGCACATATGCTGGGCAGTTCATCATGGGAGGTTTTCTCGACCTTCGTTTAAAGAAATGGTCAAGGGCATTAATCACTCGAAGTTTTGCAATTCTGCCAACTATGGTTGTAGCTATTGTTTTTAATACATCCGAAACATCATTGGACATTCTGAATGAGTGGCTGAATGTGCTTCAGTCAATGCAAATTCCTTTTGCACTTATCCCTCTGCTCACCTTGGTCTCAAAAGAGCGGGTCATGGGGACCTTTAGGGTTGGACTTGTTCTCGAGAGGGTAGCATGGACTATTGCTGCGCTGATAATGGTGATCAATGGGTACCTATTGTTAGATTTCTTCCTTTCTGAAGTGAAAGGTCTGCTGTTTGGTTTTGTAGTTTGCTCCTGCACAGCTGCTTATGTGGCATTTATTGTATATTTGATTTCCCTAAGTGGTGCTCTTCCTTCTTCTTGGGTTAATCTTCTTACCAAGAGATTTTCTTACTCTGAGGTTACCTTCCATCTTAACAAGATGAAATACCCTTTTCCTTGGAAGATGCGGACTGTGCAGCATTACAGCATTACATGA 1665 0.4589 MNSLSREDESPEDVKNEDVNRLLQPQSESRPLSLDDEEAAYEAGEKILIADLDSIDDKDSTTVPAFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATIMGLLIQLLSARIGVVTGRHLAELCRDEYPNWARLVLWFMAELALIGADIQEVIGSAIAIQILSHGVLPLWAGVVITASDCFFFLFLENYGVRKLEAVFAVLIGTMALSFAWMFGDAKPSGRELLMGILVPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSREIDTHNKGHVQEALNYYTIESTVALSVSFIINLFVTTVFAKGFYSSKQANSIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLDLRLKKWSRALITRSFAILPTMVVAIVFNTSETSLDILNEWLNVLQSMQIPFALIPLLTLVSKERVMGTFRVGLVLERVAWTIAALIMVINGYLLLDFFLSEVKGLLFGFVVCSCTAAYVAFIVYLISLSGALPSSWVNLLTKRFSYSEVTFHLNKMKYPFPWKMRTVQHYSIT 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0837 554 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 63 508 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0837 554 MobiDBLite consensus disorder prediction 1 19 - -
Lele25g0837 554 MobiDBLite consensus disorder prediction 1 35 - -
Lele25g0837 554 Hamap Divalent metal cation transporter MntH [mntH]. 57 479 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0837 554 Pfam Natural resistance-associated macrophage protein 92 453 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0837 554 PRINTS Natural resistance-associated macrophage protein signature 423 442 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0837 554 PRINTS Natural resistance-associated macrophage protein signature 361 380 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0837 554 PRINTS Natural resistance-associated macrophage protein signature 180 199 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0837 554 PRINTS Natural resistance-associated macrophage protein signature 205 226 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0837 554 PRINTS Natural resistance-associated macrophage protein signature 150 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0837 554 PRINTS Natural resistance-associated macrophage protein signature 254 277 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0837 554 PRINTS Natural resistance-associated macrophage protein signature 389 406 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0837 554 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 69 447 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0837 Lele-ChrLele25 5381477 5385662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0837 7 510 Inorganic Solute Cotransporters AT1G47240 78.656 0.0 802