Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0828 ATGGAGACACTTGGAGTCATCTCTGATGCGGAAATGAGTTACTTTCGAGGAATATTTGCCTCAGAAGAGCATGATTACTCGCCACAATTTCTTGGCCACAGCTCACTTCTGCTCGGGGAACATGATCGAATGCTCGTAGGAATAGAATCTGCATTTTGCTCTGCTTCTGAAGCTGGGGAAAATGAGTTCATGTTTAATTCTTTAGATGCTCTCAACCCAGATTTGCAGTTTATTTCTCAAGAAAGTAGTTTCAGTAGTAGCTGTAATGGTGATGCTTTCTTCGTTGCCAACCCTGGGCATATGAACTACTATCTCAGTGATCCCAATCAGGCACTAACAAATGATGCCTGCATGTTCATGAACGTTTGCATGATGCATGAAAAAGTCACTGGCAGTTTCATCCCATCGCCAGGAAACGTTTTGGTGGACGAAACTGTTGGCTTTAATGAAGACAAGAGAGGGGACAAATGGGAGAATTCTAATCAAAGTCAAGCTGCATTAGCAGCTTTTGCTGCCGAACAAATGCACCTGAAAAGGAAGTTTGATGTGCCAGAACTGGAGGCCTCAGCAGAAGATAGAATAAATATCAGCTCATCTGAGAACCAGGAGAAGAAACCTCGTGTTTCAAGAGATGTAAGTGTTTTATTTGATCCCTCTTTTTTGTCAACACTCAATAATATTAAGGGTGGAAGCAGGATTAGAGTTTCTCACAGTAATTTTCAAATGCAGGTTCAAAAGAGTACGAAGAATGCGCAGCTAAAGAAGAACCAAAAGGTTGCAGGAAGTGGCTATGGGGCAGAAGAGACTGAGACAAGATTACATGGACAGAGCTGTAGTAGTTATAGCTTAGAGGACGATAATACTTCTCAGGAAAATATTGGAGGAGCGTCGACTGAGTCTAAACCGCTAGAGACTCACAACCCAGAAGGGAAGACCAGAGCCAGTAGAGGATCCGCAACAGATCCTCAGAGCCTTTATGCCAGGAAAAGGAGGGAGAGAATAAATGAACGTCTGAGAATCCTACAGAATCTTGTTCCAAACGGAACAAAGGTCGATATAAGCACAATGCTTGAAGAGGCAGTCCATTACGTGAAATTTTTGCAGCTCCAAATTAAGCTTTTAAGTTCTGATGACCTGTGGATGTATGCTCCAATTGCTTACAACGGAGTTGACATTGGATTGAATCTCAGCCGCAATATTTCTCCAGCAACGTGA 1215 0.4272 METLGVISDAEMSYFRGIFASEEHDYSPQFLGHSSLLLGEHDRMLVGIESAFCSASEAGENEFMFNSLDALNPDLQFISQESSFSSSCNGDAFFVANPGHMNYYLSDPNQALTNDACMFMNVCMMHEKVTGSFIPSPGNVLVDETVGFNEDKRGDKWENSNQSQAALAAFAAEQMHLKRKFDVPELEASAEDRINISSSENQEKKPRVSRDVSVLFDPSFLSTLNNIKGGSRIRVSHSNFQMQVQKSTKNAQLKKNQKVAGSGYGAEETETRLHGQSCSSYSLEDDNTSQENIGGASTESKPLETHNPEGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNGVDIGLNLSRNISPAT 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0828 404 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 173 390 - -
Lele25g0828 404 Pfam Helix-loop-helix DNA-binding domain 328 368 IPR011598 GO:0046983
Lele25g0828 404 MobiDBLite consensus disorder prediction 272 303 - -
Lele25g0828 404 FunFam Basic helix-loop-helix transcription factor 319 376 - -
Lele25g0828 404 Gene3D - 320 376 IPR036638 GO:0046983
Lele25g0828 404 CDD bHLH_AtIND_like 319 381 - -
Lele25g0828 404 MobiDBLite consensus disorder prediction 244 329 - -
Lele25g0828 404 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 318 383 IPR036638 GO:0046983
Lele25g0828 404 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 318 367 IPR011598 GO:0046983
Lele25g0828 404 SMART finulus 324 373 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0828 Lele-ChrLele25 5330580 5332171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0828 284 398 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 77.119 5.87e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele25g0828 HLH 2e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0828 25 5330580 5332171 Lele28g0825 28 5316679 5318261 hybridization