Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele25g0816 | ATGAGAGCAGGCCAGCCGACAGTTGCCCATTTGGAGATATGGGACCTCCCAATCACAAAGTGGCTTTCCAAAGCAATACGTATTTTTTTACTCTCACTTGGTACTTGTCTGCTTTTGGTCTCCGCAATTATCTGCAGGACAGATTTGCCATTCTCTTTTTCTCAGATCATCATCTTCATTGATCTGTTGAAACAGAAACTCAAAACATTCAGACAATCATCTGCTTGCTTCTACTTACTGGGATTGGATCTGGTGTCTAACGTTGATCCTCTGAATAAGCAGATAGGTTTATTAGAATCATCACAGCGAGTTACACCATATTTTGCACTTCAATTCAATTCTTTGGTTTACAAGATGACAGTTTTTGTAAGTTTATCAATTGATCAATGTATTTTGCAGCTAAGCAACTACAATTCTTTTGAGGGAGTTCTTTATTGCAAGCCCCACTTCGACCAAATTTTCAAAAGAACTGGCAGTCTCGACAAAAGCTTCGAAGGGACACCAAAAATTGCAAAACCAGAGAAACAAATTGACACTGAGAAACCTGCAGTAACCAAAGCCTCAAGTATGTTTGGTGGTACCAGAGATAAATGCACTGGTTGTCAGAAAACAGTTTACCCAACTGAGAAGGTTACTGTAAATGGAACACCTTACCACAAGAGTTGTTTCAAATGCTGCCATGGAGGGTGTGTTATAAGTCCTTCGAACTACATCGCGCACGAGGGTAAACTCTACTGCAAACACCACCATATCCAACTGATCAAGGAGAAGGGCAATTTAAGCCAGCTTGAAGACCATGACAAGAGTGAAACGAATGACAAGATCATCAATGGGGAAGAAGTTGCTGCCTAG | 852 | 0.4085 | MRAGQPTVAHLEIWDLPITKWLSKAIRIFLLSLGTCLLLVSAIICRTDLPFSFSQIIIFIDLLKQKLKTFRQSSACFYLLGLDLVSNVDPLNKQIGLLESSQRVTPYFALQFNSLVYKMTVFVSLSIDQCILQLSNYNSFEGVLYCKPHFDQIFKRTGSLDKSFEGTPKIAKPEKQIDTEKPAVTKASSMFGGTRDKCTGCQKTVYPTEKVTVNGTPYHKSCFKCCHGGCVISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEDHDKSETNDKIINGEEVAA | 283 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele25g0816 | 283 | Pfam | LIM domain | 198 | 252 | IPR001781 | - | |
Lele25g0816 | 283 | Coils | Coil | 276 | 283 | - | - | |
Lele25g0816 | 283 | FunFam | LIM domain and actin-binding 1 | 192 | 262 | - | - | |
Lele25g0816 | 283 | PANTHER | OS06G0237300 PROTEIN | 129 | 182 | IPR045268 | - | |
Lele25g0816 | 283 | MobiDBLite | consensus disorder prediction | 262 | 283 | - | - | |
Lele25g0816 | 283 | CDD | LIM2_SF3 | 198 | 258 | - | - | |
Lele25g0816 | 283 | Gene3D | Cysteine Rich Protein | 193 | 262 | - | - | |
Lele25g0816 | 283 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 190 | 223 | - | - | |
Lele25g0816 | 283 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 224 | 263 | - | - | |
Lele25g0816 | 283 | SMART | lim_4 | 197 | 249 | IPR001781 | - | |
Lele25g0816 | 283 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 129 | 164 | - | - | |
Lele25g0816 | 283 | ProSiteProfiles | LIM domain profile. | 196 | 256 | IPR001781 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele25g0816 | Lele-ChrLele25 | 5254527 | 5256773 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Lele25g0816 | LIM | 7.6e-12 | CL0167 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele25g0816 | 25 | 5254527 | 5256773 | Lele01g0804 | 01 | 4664450 | 4665773 | CCT | |
Lele25g0816 | 25 | 5254527 | 5256773 | Lele03g0797 | 03 | 4665025 | 4666476 | CCT | |
Lele25g0816 | 25 | 5254527 | 5256773 | Lele04g0797 | 04 | 4886545 | 4887950 | CCT | |
Lele25g0816 | 25 | 5254527 | 5256773 | Lele27g1262 | 27 | 19436313 | 19438919 | hybridization | |
Lele25g0816 | 25 | 5254527 | 5256773 | Lele28g0813 | 28 | 5226086 | 5228907 | hybridization |