Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0811 ATGTTCGTTCGGGAGTTTCGAGCAGAAGAACTAGGGAGGGCATCAGAAGCGAGACGACGGCAACTCAGTGGCGAGGAAGCTAGCTGTCTAGTGCAATCCCATGAGGCATTCATAGCTTTATCTGTTTTGATGAGGCTCTCATTTCTGATCCACATTTTGCATTCTAAGATGGACGACGCATATGCCAGATCTATTCCTGAGGTACTCGATTTCTTTGGAGTGGACCCAACAAAAGGTCTTTCTGATAGCCAGGCGGCACAACATGCTAGACTTTATGGTACAAACGGGGCTCCTTTTTGGAAATTGGTCTTGAAGCAATTTGATGATTTGCTTGTGAAGATATTAATTGCAGCTGCACTTATCTCTTTCATTCTGGCTTTAATCAATGGAGAAACGGGCTTGATGGCATTCCTGGAGCCTTCTGTTATTTTAATGATATTGGCTGCAAATGCAGCAGTTGGGGTGATTACAGAAACAAATGCTGAAAAAGCTCTTGAGGAGCTACGGGCCTATCAAGCTGATGTTGCAACTGTACTTCGAAATGGTAGTTTTTCCATACTCCCAGCGACTGAAATTGTTCCTGGCGATATTGTGGAAATTTCTGTTGGGTGCAAAATTCCTGCTGATATGAGGATGATTGAGATGCTGAGTAATGAAGTACGTGTTGATCAGGCTTTTCTTACAGGTGTACCTGTTATATACATCATACACCGAATAGAAATTTTAAAGTGTGAGAGCAACTCCGTGGAAAAAGAGCTTGAAACTACCACAGCAACAAAGGCTGTATATCAAGACAAAACAAATATATTGTTCTCGGTGAGAATAATGGATCCCTTGTTAAAACGTGTTGCAGATAAACTGCCTTGGAAAATTTTATTTTATAATCAGGGAACAGTTGTGGTTGCTGGTAGGGCAAGAGCAACTGTGGTGGGAGTTGGTCATAACACTGCCATGGGCAGCATACGTGATTCAATGTTGCAAACAGAAGATGTAAGGATTGTGTTTTGCTCACTAAATGCTTTGCTTGTGATGCTATATCTTTATGCCTTTTTCTCAGCTGCTTATGGATATTTTTCAGTTTGTGATCCGGGTTGTCTGTCTCATGCTGCAGATAGAGTATCAGGTTATCTTCAGTGGATGTATGATTTAGGCTCTAGGAAGCTTGGTTTTGAGGTGACACCATTGAAGAAGAAGCTGGACGAGTTTGGTACCCTTTTGGCCAAGGTTATTGCAGGGATTTGCATATTGGTGTGGATTGTAAATATTGGACACTTTCGTGACCCCTCTCATGGGGGTTTCTTGCAGGGTGCTATTCATTATTTTAAGATTGCCGTTGCTCTGGCAGTTGCAGCAATTCCGGAAGGGCTCCCTGCTGTAGTTACAACGTGTTTGGCTCTTGGAACAAAGCGGATGGCTAGGTTGAATGCTATTGTTCGGTCATTACCTTCCGTGGAGACATTGGGCTGCACTACTGTAATTTGCAGTGACAAAACTGGAACTTTGACGACCAATATGATGTCTGTGATAAAGGTATGTGTGGTTCACTCTGCAAAACATAGTCCTGTTGTTACTGAATACAATGTTAGCGGAACAACATATGCACCTGAAGGCATAATCGTTGACAGTTCAGGAATGCAGCTTGATGTTCCAGCTCAATTGCCATGTCTTCTTCACACAGCAATGTGTTCTGCTCTTTGCAATGAGTCCACCCTGCAGTATAACCATGATAAAGGAAAGTACGAAAAAATTGGAGAGTCAACTGAAGTGGCACTTCGTGTCCTGGCCGAAAAAGTTGGTCTCCCTGGTTTTGACTCTATGCCATCAGCCTTGAACATGTTGAGCAAGCATGAACGGGCATCTTACTGTAATCATTATTGGCAGGAACAATTTAGAAAGATAGATCTGTTGGATTTTTCTCGAGATCGGAAAATGATGAGTGTCCTTTGCAACCGAAACCAGCTTCATGTGTTGTTCTCCAAGGGTGCTCCAGAGAGCATTATTTCTAGATGTACAACCATCATGTGCAATGATGATGGTTCCGTTGTACCACTTGCTGCTGATATTCGAGCTGAGCTAGACTCAAGTTCTTCATACACTTGTGCTATGTCTGGACTCATACTTTTTGCAGGAAAAGAAACATTGAGATGCCTAGCTTTAGCCCTGAAATGGGTGCCCTTGAGTCAACAACGTCTTTCCTATGATGATGAGAAAGATCTTACATTTATTGGGTTGGTTGGAATGCTTGATCCACCAAGAGATGAAGTAAGAAATGCAATGCTTTCATGCATGACTGCTGGCATACGTGTTATAGTTGTTACAGGGGATAACAAGTCCACTGCTGAGTCACTTTGCCGCAAGATAGGGGCTTTTGACCACTTCTTGGAATTTAATGAACATTCCTATACTGCTTCTGAGTTTGAAGAACTTCCAGCTATGCAGCAAACTCTTGCTTTGCAACGTATGGCCCTTTTTGCCAGGGTTGAGCCATCTCATAAAAGGATGCTGGTTGAAGCATTGCAGCACCAGAATGAAGTGGTTGCTATGACTGGTGACGGTGTCAATGATGCACCTGCACTGAAGAAGGCAGACATAGGAATCGCTATGGGTTCAGGTACAGCTGTTGCCAAGAGTGCTTCGGACATGGTACTGGCTGATGATAACTTTGCTACAATTGTTGCGGCTGTGGCAGAGGGAAGGGCCATATACAACAATACAAAGCAGTTCATTAGATACATGATCTCTTCTAATATTGGTGAAGTATTCTGTATATTTGTGGCTGCTGTGCTTGGAATTCCTGATACCCTTGCCCCTGTCCAGCTGCTTTGGGTCAATTTGGTTACTGATGGATTGCCTGCCACTGCCATCGGCTTTAATAAGCCAGATTCTGATGTAATGAAGGCCAAACCTCGTAAGGTGAATGAAGCAGTGGTTACAGGGTGGCTGTTCTTCCGTTATCTAGTAATTGGAGCTTATGTTGGTCTCGCTACTATTGCTGGTTTTATTTGGTGGTTTGTTTACTGTGACAGTGGCCCAAAACTACCATATACTGAATTGATGAATTTTGACACTTGCCCAACAAGGCAGACAACCTACCCATGCAGTATATTTGATGATCGACACCCATCTACTGTAGCAATGACTGTGCTTGTCGTTGTTGAGATGTTCAATGCTTTGAACAATCTTAGCGAGAATCAATCTCTTCTAGTTATCCCTCCATGGAGTAACTTATGGCTTGTTGGTTCAATAATTCTTACTTTGCTTCTTCACATGCTTATTTTGTATGTGCGTCCTCTCTCAGTTCTTTTCTCTGTAACCCCGCTATCCTGGGATGACTGGTTGATTGTCCTGTATCTTTCACTACCTGTTATATTCATCGATGAGGTGTTAAAGTTATTTTCCAGGCGTCCCATTGGCCTGAGGTTCAGATTATGGTTCAGGAGGCCTGATTTACTTCCAAAAAGAGAAGCACGTGATAAGTAA 3480 0.429 MFVREFRAEELGRASEARRRQLSGEEASCLVQSHEAFIALSVLMRLSFLIHILHSKMDDAYARSIPEVLDFFGVDPTKGLSDSQAAQHARLYGTNGAPFWKLVLKQFDDLLVKILIAAALISFILALINGETGLMAFLEPSVILMILAANAAVGVITETNAEKALEELRAYQADVATVLRNGSFSILPATEIVPGDIVEISVGCKIPADMRMIEMLSNEVRVDQAFLTGVPVIYIIHRIEILKCESNSVEKELETTTATKAVYQDKTNILFSVRIMDPLLKRVADKLPWKILFYNQGTVVVAGRARATVVGVGHNTAMGSIRDSMLQTEDVRIVFCSLNALLVMLYLYAFFSAAYGYFSVCDPGCLSHAADRVSGYLQWMYDLGSRKLGFEVTPLKKKLDEFGTLLAKVIAGICILVWIVNIGHFRDPSHGGFLQGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVIKVCVVHSAKHSPVVTEYNVSGTTYAPEGIIVDSSGMQLDVPAQLPCLLHTAMCSALCNESTLQYNHDKGKYEKIGESTEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHYWQEQFRKIDLLDFSRDRKMMSVLCNRNQLHVLFSKGAPESIISRCTTIMCNDDGSVVPLAADIRAELDSSSSYTCAMSGLILFAGKETLRCLALALKWVPLSQQRLSYDDEKDLTFIGLVGMLDPPRDEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDHFLEFNEHSYTASEFEELPAMQQTLALQRMALFARVEPSHKRMLVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVFCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKPDSDVMKAKPRKVNEAVVTGWLFFRYLVIGAYVGLATIAGFIWWFVYCDSGPKLPYTELMNFDTCPTRQTTYPCSIFDDRHPSTVAMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVGSIILTLLLHMLILYVRPLSVLFSVTPLSWDDWLIVLYLSLPVIFIDEVLKLFSRRPIGLRFRLWFRRPDLLPKREARDK 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0811 1159 SUPERFAMILY HAD-like 736 897 IPR036412 -
Lele25g0811 1159 Pfam Cation transporter/ATPase, N-terminus 62 122 IPR004014 -
Lele25g0811 1159 Pfam Cation transport ATPase (P-type) 564 673 - -
Lele25g0811 1159 SFLD Haloacid Dehalogenase 475 901 - -
Lele25g0811 1159 SMART Cation_ATPase_N_a_2 59 127 IPR004014 -
Lele25g0811 1159 PANTHER CALCIUM-TRANSPORTING ATPASE 63 1136 - -
Lele25g0811 1159 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 501 747 IPR023299 GO:0000166
Lele25g0811 1159 FunFam Sodium/potassium-transporting ATPase subunit alpha 742 888 - -
Lele25g0811 1159 Gene3D - 866 1138 - -
Lele25g0811 1159 Gene3D - 749 865 IPR023214 -
Lele25g0811 1159 Pfam E1-E2 ATPase 172 332 - -
Lele25g0811 1159 Pfam E1-E2 ATPase 392 473 - -
Lele25g0811 1159 SFLD p-type atpase 475 901 IPR044492 -
Lele25g0811 1159 SUPERFAMILY Calcium ATPase, transmembrane domain M 58 1135 IPR023298 -
Lele25g0811 1159 Gene3D - 56 330 - -
Lele25g0811 1159 Gene3D - 504 748 IPR023299 GO:0000166
Lele25g0811 1159 Pfam haloacid dehalogenase-like hydrolase 742 863 - -
Lele25g0811 1159 PRINTS P-type cation-transporting ATPase superfamily signature 743 754 - -
Lele25g0811 1159 PRINTS P-type cation-transporting ATPase superfamily signature 872 884 - -
Lele25g0811 1159 PRINTS P-type cation-transporting ATPase superfamily signature 765 775 - -
Lele25g0811 1159 PRINTS P-type cation-transporting ATPase superfamily signature 849 868 - -
Lele25g0811 1159 PRINTS P-type cation-transporting ATPase superfamily signature 494 508 - -
Lele25g0811 1159 TIGRFAM ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 391 1004 IPR005782 GO:0005388|GO:0006816|GO:0016020
Lele25g0811 1159 Coils Coil 161 181 - -
Lele25g0811 1159 Pfam Cation transporting ATPase, C-terminus 933 1132 IPR006068 -
Lele25g0811 1159 Gene3D - 385 499 - -
Lele25g0811 1159 FunFam Calcium-transporting ATPase 504 750 - -
Lele25g0811 1159 SUPERFAMILY Calcium ATPase, transduction domain A 174 324 IPR008250 -
Lele25g0811 1159 PRINTS H+-transporting ATPase (proton pump) signature 880 905 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele25g0811 1159 PRINTS H+-transporting ATPase (proton pump) signature 821 837 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele25g0811 1159 PRINTS H+-transporting ATPase (proton pump) signature 849 865 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele25g0811 1159 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 844 1138 - -
Lele25g0811 1159 ProSitePatterns E1-E2 ATPases phosphorylation site. 496 502 IPR018303 -
Lele25g0811 1159 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 820 934 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele25g0811 1159 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 389 518 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele25g0811 1159 FunFam Calcium-transporting ATPase, putative 386 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0811 Lele-ChrLele25 5203803 5228518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0811 57 330 Primary Pumps ATPases(2) AT1G10130 67.857 1.65e-106 357