Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0798 ATGGCGCCGAATTCGACTCCGAAACTGGAGGACTTTCTCGGTGGTGCAACTATGGGGAGTCACGATGCGATGGCCTTGAGCCTTGACAGCATCTACTATGGCACTCAGAATCATGCACAGGCTCAAGCCCATAGAGATCATTCTCTTGACTTTCTTTCGGAGCCTTTCAGGCAACAAGACCCCATCTCCGTCCAGTCGCATCCTTATTATTCTGGAGTTGCTTGCCATGCTATCTATCCATCCCCATTGGAGCAACAAAGCAAGGACCCACAAATGCAACCATTGTCTGAGAAAGGCATCACTTGTCTGAAAAACTGGGTGGCTCCCGGCAGGAACTATTCTGCTCAACGAGGTTTAGAGCAGAAAAACAATGGATGCATGGAGGACGACGGTGGTGGAGCTTCCGGGTCAGTTGGTAAAGTTGGATGTGGAGATTTACAGTCCCTGGGCTTATCCGTGAGCCCTGGTTCACAGTCTAGCTGTGTAACTGCTCCACAGCAGATTTCACCTCCTAGCACTGACGTGGTGGCAATGGAAGGAAAGAAAAGAGGGCCTGGAAAGTTGGGCCAAAAACAGCCTGTGCATAGGAAATCGATCGACACTTTTGGCCAGAGAACGTCTCAGTTCCGTGGCGTTACAAGGCACAGATGGACTGGTAGATATGAAGCACATTTATGGGATAACAGTTGTAAGAAGGAAGGGCAGACGAGGAAAGGAAGACAAGGGGGCTATGATATGGAAGAGAAAGCTGCTAGAGCTTATGATCTTGCAGCCCTCAAGTACTGGGGACCCTCAACCCATATTAACTTTCCGTTGGAAAATTACCAGGCTGAACTTGAAGAAATGAAGAACATGAGCAGGCAAGAGTACGTCGCCCACTTAAGAAGAAAAAGTAGTGGTTTTTCCAGAGGGGCTTCAATGTATAGAGGAGTGACGAGACACCATCAACATGGAAGATGGCAAGCAAGGATAGGTAGAGTTGCAGGAAACAAGGACCTTTATCTTGGAACATTTAGCACCCAGGAGGAGGCAGCTGAAGCATATGACATAGCTGCAATCAAGTTTCGAGGTGTGAACGCAGTGACCAACTTTGACATATCTAGGTACGATGTGGACAGGATTATGGCCAGCAATACCCTTCTGGCTGGTGAGCTAGCTCGGCGAAGCAAAGATAGCGAGCCGAGAATGGAAGCCATTGAGTACAATGTAGCATCGAACCAGAGCAATGGGGAAGCGGTTCAAACCCAAAGGAACGACGACAACAGCAACAACAACGGTTCAGATTGGAAGATGTTGTATCCTCCAAATGGGTGTGAGCAGAAAACCGTGAACTGCGGAAACTACAGGAATTCAGCCATGTCTGTGGCCCTACGAGATCTCATTGGGATTGACTCAGTAGCGAGGTCAGTTGCTGTTCTGCTAGTTCCAGCTAAGTACAAGAACCAGCTCAATATGTTTCCCCAATAA 1467 0.484 MAPNSTPKLEDFLGGATMGSHDAMALSLDSIYYGTQNHAQAQAHRDHSLDFLSEPFRQQDPISVQSHPYYSGVACHAIYPSPLEQQSKDPQMQPLSEKGITCLKNWVAPGRNYSAQRGLEQKNNGCMEDDGGGASGSVGKVGCGDLQSLGLSVSPGSQSSCVTAPQQISPPSTDVVAMEGKKRGPGKLGQKQPVHRKSIDTFGQRTSQFRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQAELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDISRYDVDRIMASNTLLAGELARRSKDSEPRMEAIEYNVASNQSNGEAVQTQRNDDNSNNNGSDWKMLYPPNGCEQKTVNCGNYRNSAMSVALRDLIGIDSVARSVAVLLVPAKYKNQLNMFPQ 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0798 488 Gene3D AP2/ERF domain 307 367 IPR036955 GO:0003700|GO:0006355
Lele25g0798 488 Gene3D AP2/ERF domain 207 273 IPR036955 GO:0003700|GO:0006355
Lele25g0798 488 ProSiteProfiles AP2/ERF domain profile. 307 365 IPR001471 GO:0003700|GO:0006355
Lele25g0798 488 SUPERFAMILY DNA-binding domain 306 367 IPR016177 GO:0003677
Lele25g0798 488 FunFam AP2-like ethylene-responsive transcription factor ANT 207 273 - -
Lele25g0798 488 Pfam AP2 domain 308 357 IPR001471 GO:0003700|GO:0006355
Lele25g0798 488 Pfam AP2 domain 208 263 IPR001471 GO:0003700|GO:0006355
Lele25g0798 488 MobiDBLite consensus disorder prediction 406 430 - -
Lele25g0798 488 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 418 - -
Lele25g0798 488 SUPERFAMILY DNA-binding domain 207 273 IPR016177 GO:0003677
Lele25g0798 488 PRINTS Ethylene responsive element binding protein signature 347 367 IPR001471 GO:0003700|GO:0006355
Lele25g0798 488 PRINTS Ethylene responsive element binding protein signature 209 220 IPR001471 GO:0003700|GO:0006355
Lele25g0798 488 SMART rav1_2 307 371 IPR001471 GO:0003700|GO:0006355
Lele25g0798 488 SMART rav1_2 208 277 IPR001471 GO:0003700|GO:0006355
Lele25g0798 488 ProSiteProfiles AP2/ERF domain profile. 208 271 IPR001471 GO:0003700|GO:0006355
Lele25g0798 488 CDD AP2 207 271 IPR001471 GO:0003700|GO:0006355
Lele25g0798 488 FunFam AP2-like ethylene-responsive transcription factor 306 367 - -
Lele25g0798 488 Coils Coil 272 292 - -
Lele25g0798 488 MobiDBLite consensus disorder prediction 406 433 - -
Lele25g0798 488 CDD AP2 306 367 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0798 Lele-ChrLele25 5105763 5108951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0798 133 392 AP2-EREBP Transcription Factor Family AT4G37750 72.069 1.07e-137 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele25g0798 AP2 5.5e-10 CL0081