Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0797 ATGCCCCTGATGATACGGTCAGACACACCAGTATAGATTCAGCTATTATATAGGTCACTAGTTAAAGAGTTATATAGGAGTTTAGCAGCTCTGGAGATGGGTGGTCATGAAAATGCTATGGGGTTTCAACATGGACAAGAGACAGTTCTCAATGGCACGTCATCGGGTTTGAGCAACATTGTTTCTGAAATCGGAATGAGCTCTGTGTCTATGGCCAAGCCTCCTATTGTGACTAATCCTTTTCTTGGGTCGTCTTCTTCTACCTGGGATCCTCTTGTTTCCCTGAGTCAGACTCAAACTTTTGGAGGCTCTTCCATGGTTTCTCACAGTGAGTTTGGCAGCTCATCTTACCCTCTTGTGTTGGAGAATCAGGGAATGAGTAGCACATCTCACCTTGTTCAATATATGTCCGATTCTAATTTCGCTGTTCCTTCCTATGCAAGTGGAAGCTTCTCCGAAATGGTTGGCTCTTTTCCCCAACATGGCTGTTCTGATTTAGCTAATAAAAGGTATGGCCCAAGTTATAACCAAAACGAGGAGACAGCCATGAAAAGGGCTCCATTAAATGGTTCGCAATCTCAGCTAGAGGATCCAACTCCTGAAGAAGGAGCCACAGGATCTGCACCTAATGGAAGTAGAAGAAAACGAGGGCTTGATCACAATCCCTCGTTCAGTCCAAGCAAGAATGCTGAAGGGGAACCGATGAAGGATTCTTCTGGGAAGAGCTCCGATGGGGCAAAAGAACAAGATGAGAAGAAACAAAAGGTCGAGCAAAACAATACTAGTGTAGATTTGCGTGGTAAGCAATCATCAAAGCAAGCTAAAGACAACTCTCAAAGTGGAGAAGCTCCCAAAGAAAATTTCATCCACGTGAGGGCTCGAAGAGGTCAAGCTACGAACAGCCATAGCCTTGCAGAAAGGGTAAGAAGAGAGAAGATTAGTGAGCGAATGAGGCTGCTTCAAGAACTTGTTCCAGGATGCAACAAGATAACTGGGAAAGCAGTGATGCTGGATGAGATTATTAACTATGTTCAATCGCTGCAGCAACAGGTTGAGTTTTTGTCGATGAAACTTGCCACCGTGAACCCAGAACTGAATTTTGATGTAGAAAGGATCCTATCCAAAGATATTCTTCAGTCGCGCATTGCAAATGGGACTATTAGTGGATATGGCATGAACTCCCCTCACTCGTTCCCTAGTGGAAGTTTTCAGGGAACTCTTCCAGGACCAGGCATACCCAACACATCACAATTCCCTCCTTTGCCTCAGAGTGTTTTGGAGCATGAGTTCCAAAACTTGTATGGAATGGTATACGATTCCAGTACAGCTCTGGACAATGCAGGACCCGGTGGTAATACTCGGAAATTTTCTTTTGGGGGGGAGGTTGAAAACAGAGTTGTAATGGGTACAAGTGAGCATGATGTCGCCTACTTAATTCATGAAATTCCAAATTTGACCGGAATTGGTATTCCATACTTAGCCTAG 1485 0.4438 MPLMIRSDTPVXIQLLYRSLVKELYRSLAALEMGGHENAMGFQHGQETVLNGTSSGLSNIVSEIGMSSVSMAKPPIVTNPFLGSSSSTWDPLVSLSQTQTFGGSSMVSHSEFGSSSYPLVLENQGMSSTSHLVQYMSDSNFAVPSYASGSFSEMVGSFPQHGCSDLANKRYGPSYNQNEETAMKRAPLNGSQSQLEDPTPEEGATGSAPNGSRRKRGLDHNPSFSPSKNAEGEPMKDSSGKSSDGAKEQDEKKQKVEQNNTSVDLRGKQSSKQAKDNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVERILSKDILQSRIANGTISGYGMNSPHSFPSGSFQGTLPGPGIPNTSQFPPLPQSVLEHEFQNLYGMVYDSSTALDNAGPGGNTRKFSFGGEVENRVVMGTSEHDVAYLIHEIPNLTGIGIPYLA 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0797 494 FunFam Basic helix-loop-helix transcription factor 294 366 - -
Lele25g0797 494 Gene3D - 294 368 IPR036638 GO:0046983
Lele25g0797 494 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 184 397 IPR024097 GO:0006355
Lele25g0797 494 MobiDBLite consensus disorder prediction 170 200 - -
Lele25g0797 494 MobiDBLite consensus disorder prediction 157 307 - -
Lele25g0797 494 MobiDBLite consensus disorder prediction 234 259 - -
Lele25g0797 494 MobiDBLite consensus disorder prediction 260 284 - -
Lele25g0797 494 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 295 365 IPR036638 GO:0046983
Lele25g0797 494 Pfam Helix-loop-helix DNA-binding domain 300 348 IPR011598 GO:0046983
Lele25g0797 494 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 297 347 IPR011598 GO:0046983
Lele25g0797 494 CDD bHLH_AtBPE_like 287 372 - -
Lele25g0797 494 MobiDBLite consensus disorder prediction 394 421 - -
Lele25g0797 494 SMART finulus 303 353 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0797 Lele-ChrLele25 5094842 5098330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0797 33 438 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 41.889 5.74e-80 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele25g0797 HLH 5.5e-06 No_clan