Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0788 ATGGGTTTTGCCGATATGCCTAATACGGGCCTCGGCCTCGGTCTCGGCCTCGGCCTTCACCAGCAGTCGGAGAGTTGCCGCAGAGAAATCCGACTCAAGAAACATGAGGATCCGTACAAATGTGACCAGAAGCTATGTACCTCTCTTACGTTAGGACCGCCTGATGATCTGGAGGCGAATGAACAGCTTCTTCCTGCCAAGACTGAATCTGTTCATTTCCGTGCAATAGCGGCGTCTTCTTCTCCCAGCGCCGCCTCTTCCTTCTCCAACTCCTCCAGCATCAAGAGGGAGAATAAGGAGTCCGTCGGCGACGAGCTTGATTTGGAAGTAGACAATAAGGTTAATAATCCATCCAAGGTAGGCCTCGACGTAGACGAAGACGGTAATCCCAGGAAGAAACTTAGGCTCACCAAAGAACAATCCACCGTTTTAGAGGACAGCTTCAAAGATCACTCCACTCTCAATCCAAAGCAGAAGCAAGAATTGGCGAGGAAGTTAAACCTGCGTGCCAGACAAGTAGAGGTCTGGTTTCAAAACCGAAGAGCGAGGACGAAACTGAAACAAACGGAAGTTGACTGTGAGTTACTCAAGAAGTGCTGCAAAACGCTAACGGAAGAGAACAGGAGACTGCAAAAGGAGTTGCAAGAACTGAGATCAATGAAAACGACATCGCAGGGACCCTTGTATATGCAGCTTCCGGCAGCCACCCTCACCTTATGCCCTTCTTGTGAGAGAATTTGCGGCGAAGGTGGCGGAACCACCGCCAACGGCTCTCCCGCTACCACCGCCTTCCTTACGGGATCAAAGGCCCATCCCTTGTACAAAAGCAACTATCCGTTCACCCACTCATCTGCAGCTTGCTAA 864 0.5081 MGFADMPNTGLGLGLGLGLHQQSESCRREIRLKKHEDPYKCDQKLCTSLTLGPPDDLEANEQLLPAKTESVHFRAIAASSSPSAASSFSNSSSIKRENKESVGDELDLEVDNKVNNPSKVGLDVDEDGNPRKKLRLTKEQSTVLEDSFKDHSTLNPKQKQELARKLNLRARQVEVWFQNRRARTKLKQTEVDCELLKKCCKTLTEENRRLQKELQELRSMKTTSQGPLYMQLPAATLTLCPSCERICGEGGGTTANGSPATTAFLTGSKAHPLYKSNYPFTHSSAAC 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0788 287 SMART HOX_1 129 191 IPR001356 GO:0003677
Lele25g0788 287 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 12 263 - -
Lele25g0788 287 CDD homeodomain 130 188 IPR001356 GO:0003677
Lele25g0788 287 Pfam Homeobox associated leucine zipper 187 221 IPR003106 GO:0006355|GO:0043565
Lele25g0788 287 ProSitePatterns 'Homeobox' domain signature. 162 185 IPR017970 GO:0000981|GO:0006355
Lele25g0788 287 Coils Coil 193 223 - -
Lele25g0788 287 SMART halz 187 232 IPR003106 GO:0006355|GO:0043565
Lele25g0788 287 Pfam Homeodomain 131 185 IPR001356 GO:0003677
Lele25g0788 287 MobiDBLite consensus disorder prediction 82 96 - -
Lele25g0788 287 MobiDBLite consensus disorder prediction 97 112 - -
Lele25g0788 287 MobiDBLite consensus disorder prediction 82 132 - -
Lele25g0788 287 ProSiteProfiles 'Homeobox' domain profile. 127 187 IPR001356 GO:0003677
Lele25g0788 287 SUPERFAMILY Homeodomain-like 128 195 IPR009057 -
Lele25g0788 287 Gene3D - 124 192 - -
Lele25g0788 287 FunFam Homeobox-leucine zipper protein 18 117 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0788 Lele-ChrLele25 5029990 5031111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0788 125 287 Homeobox Transcription Factor Family AT2G22800 61.932 2.25e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele25g0788 Homeodomain 4.5e-17 CL0123