Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0783 ATGAAACAAAACAAGAGTGTCCTGCGAGATAAGTCAATCCTTAGTCTCTGTTCTTGTTCTCTTCTTCTGAAAGAGGCCATGGGAAGAGCTCCTTGCTGTGACAAAGCCAGTGTTAAGAGAGGCCCTTGGTCTCCCGAAGAAGACGCTACTCTCAGGACTTATGTTCAAACTCATGGCACTGGTGGTAATTGGATTGCATTGCCCGGTAAAGCAGGACTTCGGAGGTGTGGCAAGAGTTGCCGTCTACGGTGGCTCAATTATCTAAGGCCAGACATCAAACACGGAGGCTTTACTGAAGAAGAAGACAACATCATCTGTACCCTTTACGGGCAAATGGGAAGCAGATGGTCGGCCATAGCCTCTCAACTTGCTGGTAGAACAGACAATGATGTGAAGAACTACTGGAACACCAAGTTGAAGAAGAAGCTCATGGCAGGAAAAGTCATGAACCTCAAAACAGGGACCGACTCTAGCATCACTGCTACTCTTCCTTCGACCCCATTACTAACTCATCATAATGTCCAAATCCAAAACCAGAATTCATATAACTTTCCTGCTTCGCAAATAAACCACACTTCATCTTCCCCAACTCCGCTGATCCCGACCGAAGCTAATTCTGGGTTTCACATCAACACTCACACCATGATCAGTTTTGAGCCAACTCAATTATACAGTCCAGCAGGGTTCATTGATGTCTCAGAAATCAACGCAAGCTCAAGTATGATGTCTTTGTCTCAGGAAGGTTCAAGCATTTCTGCAGATTCATCTTTGATAGCAACGGAGAACAAATGGTTGCCTCTGCCGGAACATGCAGGGGACGAAGCAACCCAAGTGTTGATGAACTATGGGTTTGGGTTTCCCTCTGACTTAGCCAACAATGGCTTTTACAACCAAGAGAAAATCGGGGAATTCGCTTCAAGTTTCTTTTCTCATGAGTTGCTTGATTTTGGCAATGCTGACATGTAG 966 0.4534 MKQNKSVLRDKSILSLCSCSLLLKEAMGRAPCCDKASVKRGPWSPEEDATLRTYVQTHGTGGNWIALPGKAGLRRCGKSCRLRWLNYLRPDIKHGGFTEEEDNIICTLYGQMGSRWSAIASQLAGRTDNDVKNYWNTKLKKKLMAGKVMNLKTGTDSSITATLPSTPLLTHHNVQIQNQNSYNFPASQINHTSSSPTPLIPTEANSGFHINTHTMISFEPTQLYSPAGFIDVSEINASSSMMSLSQEGSSISADSSLIATENKWLPLPEHAGDEATQVLMNYGFGFPSDLANNGFYNQEKIGEFASSFFSHELLDFGNADM 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0783 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 88 IPR017930 -
Lele25g0783 321 SMART sant 93 141 IPR001005 -
Lele25g0783 321 SMART sant 39 90 IPR001005 -
Lele25g0783 321 Pfam Myb-like DNA-binding domain 40 88 IPR001005 -
Lele25g0783 321 Pfam Myb-like DNA-binding domain 95 137 IPR001005 -
Lele25g0783 321 SUPERFAMILY Homeodomain-like 37 135 IPR009057 -
Lele25g0783 321 Gene3D - 33 94 - -
Lele25g0783 321 PANTHER OS09G0431300 PROTEIN 27 245 - -
Lele25g0783 321 ProSiteProfiles Myb-like domain profile. 35 88 IPR001005 -
Lele25g0783 321 CDD SANT 97 139 IPR001005 -
Lele25g0783 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 143 IPR017930 -
Lele25g0783 321 FunFam Transcription factor RAX3 33 94 - -
Lele25g0783 321 Gene3D - 96 160 - -
Lele25g0783 321 ProSiteProfiles Myb-like domain profile. 89 139 IPR001005 -
Lele25g0783 321 CDD SANT 42 88 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0783 Lele-ChrLele25 4990616 4992229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0783 27 144 MYB Transcription Factor Family AT5G65790 80.508 5.71e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele25g0783 Myb_DNA-binding 1.2e-12 CL0123