Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0774 ATGAGAAATCTTTTCGTGCGGCTAAAATGTGAAGCCACGATTCAAAAGGAAAGGGCAACAAAGGTGAAAAATCTTGTATCAGATATGGGATCTGTCTTGCATCACTTAAGGAGCCCTGTGGGTCCAGTTAACAGCACCAGGTTTCAGCAGGGAGAATCCGGATATTTTGATTGCGATGACTGCAGCGAGGCAGATAATAGGAGGGGGTTGAAGGAGGACAAAAGACATGAGAGAGATGGGCCCAGTAAAGCCTGCAACAGAAATGAGTGGGCTCTGCACCACAGAGCGATGTGTTTTCTTCTTCCCCCCACTCTCCCTCCTTTCTTTTGTTATTACTTCTTTTGTGGCCCTTGAAATGAAATAGCTTCCTGTTCATGCAAAGAAACCAACGCCCTTATGGTATGGTATTGGCCTTCTTGGTTCAACATGGTTACTTGTGGTTCTCGCTGGAAATATTTGCAAGAAGACATCGGTTTGGCTAGATTAGGGGAAGGGGAGAGCAAAGAAGCCACTTGTAAGAATTCAAACAGAGTGATGGAGAATGATATGTTTGATACTCCAATGGACATGGCTGGTCGAAGTTCTGCTGTGTTAGATGAAATTCCACTCATTGAGGGCAATTTATTTGACCAAACCCGAATCATGAATGGAAGTTCAATGCTTGCTGCTGGAATGCAAGATGAACTCATAAGTAGTGTCCATTCGGATGTTCCTGTAACGAATCCTGCCTGCATTGCTGCTGATCTTAATTCCATGGTTCCATCTCAAGGAAAGAACTTTTTAGCTCCATGTCCCCGAAACAACAGTGTGTTTCAAGATCAACAATCTGGAGCCACAATCACTACTGCTGCAAGATTTGGTCTTCAAGAAAACTTTGAGAAGTCAGCAGCGCGGTCTCCTTCAGTAGCCTGTTCATTGGAGGCACTGGCACCATATATGTTAAGCAATTGGCAGGATAATTTAAACACGTTGCTTCCAACTTTTGGAGATCGTGTGTACGATGAAGTACCTGGTACTACTACTAGGTTCCAGACTTATTCGTCTCCAGCAAACTTGACCCATCATGGTTATGATTACCAGAATTTCAGGAATGAGCTCTCATTAAGTCTTACAACATCTCCCACCACAGGTCAGTGCTCAGAGGTGAGTTCTGATAGTTTGGAACAAGCTTCCTGTAGCAGTAGACATGTGAATTTTTCACAAGCAATATTGGGTTCCAGATATCTTGCTGGGATTCAAGAAATACTTGCTCAAATTGCAAGGTATTCACTTGAAAATACAGAACAGATAAATTGTTCAGCTGCTTGTAGTAGTAGAGCCAGAGCCAGAGCAGAAGGGAGTATATCAACCTCAGATCTTCCATCCAGGAGAACGATAGAGACAACAAATCACAATGCAGATTCTATGTTTGAAGCTCAAGAGAATTCATTTGCAAGGCACGATGCTGCTGAATCAAATAAATCCCAGCTTCTGACACTTCTACAACTGGTGGATAGTCGAAATAATCGGTGTTTGGATGAGATACATACTGTTGTATCCGCATTTCATGCTGCTACAGAGTTGGACCCGCAAGTTCATGCACAATTTGCACTTCAGACAATCTCAATGTTGTACAAGGATTTGCGTGAGAGGATAAGCAATTATATCCTTTCCATGGGAGAAAAGTTTAACAACTCAGGCTCAGAAGAAGAGAAGGAAAAGTCGACGGAAGCTTTAATCATCGAAAAGCACTGGGCTCTGCAGCAATTGAAAAGGAAAGAGCATCAGTTATGGAGGCCCCAAAGGGGCTTGCCAGAACGATCTGTCTCCGTTCTACGGGCTTGGATGTTTCAGAATTTCCTCCATCCGTATCCAAAAGATGCAGAGAAGCAATTACTTGCAGTAAAAAGTGGATTGACTAGAAGCCAGGTATCAAACTGGTTTATTAATGCTCGTGTAAGGCTGTGGAAACCTTTGATTGAGGAAATGTACGCTGAAATGAACAGAAGAAGGGCTCTTAGAAATGAAGAAAGCTCGCAGAGCGGCAGGGTACGCTTGAGTAATCAAAGATTTAGTATCAATTCAGGCTAA 2070 0.4304 MRNLFVRLKCEATIQKERATKVKNLVSDMGSVLHHLRSPVGPVNSTRFQQGESGYFDCDDCSEADNRRGLKEDKRHERDGPSKACNRNEWALHHRAMCFLLPPTLPPFFCYYFFCGPXNEIASCSCKETNALMVWYWPSWFNMVTCGSRWKYLQEDIGLARLGEGESKEATCKNSNRVMENDMFDTPMDMAGRSSAVLDEIPLIEGNLFDQTRIMNGSSMLAAGMQDELISSVHSDVPVTNPACIAADLNSMVPSQGKNFLAPCPRNNSVFQDQQSGATITTAARFGLQENFEKSAARSPSVACSLEALAPYMLSNWQDNLNTLLPTFGDRVYDEVPGTTTRFQTYSSPANLTHHGYDYQNFRNELSLSLTTSPTTGQCSEVSSDSLEQASCSSRHVNFSQAILGSRYLAGIQEILAQIARYSLENTEQINCSAACSSRARARAEGSISTSDLPSRRTIETTNHNADSMFEAQENSFARHDAAESNKSQLLTLLQLVDSRNNRCLDEIHTVVSAFHAATELDPQVHAQFALQTISMLYKDLRERISNYILSMGEKFNNSGSEEEKEKSTEALIIEKHWALQQLKRKEHQLWRPQRGLPERSVSVLRAWMFQNFLHPYPKDAEKQLLAVKSGLTRSQVSNWFINARVRLWKPLIEEMYAEMNRRRALRNEESSQSGRVRLSNQRFSINSG 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0774 689 Pfam Associated with HOX 403 546 IPR006563 -
Lele25g0774 689 SMART HOX_1 591 655 IPR001356 GO:0003677
Lele25g0774 689 SMART prehox3 397 547 IPR006563 -
Lele25g0774 689 Gene3D - 586 666 - -
Lele25g0774 689 ProSiteProfiles 'Homeobox' domain profile. 588 651 IPR001356 GO:0003677
Lele25g0774 689 Pfam Homeobox KN domain 608 647 IPR008422 GO:0003677|GO:0006355
Lele25g0774 689 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 341 671 - -
Lele25g0774 689 CDD homeodomain 591 651 IPR001356 GO:0003677
Lele25g0774 689 SUPERFAMILY Homeodomain-like 593 660 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0774 Lele-ChrLele25 4929900 4934331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0774 364 664 Homeobox Transcription Factor Family AT4G32980 56.230 8.04e-104 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele25g0774 POX 4.8e-25 No_clan