Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0773 ATGGCCTCATCAGAAGCACGTCCTCAGGGTCTAACACCAGAGGAATTTGCAAAAATCGAATCCATCATCCAAAAATACCACAAGTTCGAGCCATCCCCCAACACGTGCACTTCCATTATAACCCAACGAATCGAGGGTCCGGCTCGCAGAGTCTGGCCTCTGGTTCGGAGCTTCGACAACCCTCAGAAGTACAAGCACTTCATCAAGAGCTGCAACATGAAGGGTGACGGCGGCGTTGGCAGCATCCGAGAGGTCACCGTCGTCTCCGGGCTCCCGGCGTCCACGAGCACCGAGAGGCTCGAGATTTTGGACGACAGCAAGCACATACTCAGCTTTAGGGTTGTGGGCGGCGAACACCGGCTCAAGAATTACCGGTCCATCACGTCGGTGAATGAGTTCGAGAAGGAAGGTAAGGAATACACGATTGTGTTGGAGTCGTATATCGTGGACATACCGGAGGGCAATACGGGAGAAGATACGAAGATGTTCGTGGACACTGTGGTGAAGCTCAACCTGCAGAAACTTGGGATCGTCGCCATGGCCACACCGCTTCCTCAAGATAATTAG 567 0.5326 MASSEARPQGLTPEEFAKIESIIQKYHKFEPSPNTCTSIITQRIEGPARRVWPLVRSFDNPQKYKHFIKSCNMKGDGGVGSIREVTVVSGLPASTSTERLEILDDSKHILSFRVVGGEHRLKNYRSITSVNEFEKEGKEYTIVLESYIVDIPEGNTGEDTKMFVDTVVKLNLQKLGIVAMATPLPQDN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0773 188 Gene3D - 1 187 IPR023393 -
Lele25g0773 188 CDD PYR_PYL_RCAR_like 36 175 - -
Lele25g0773 188 SUPERFAMILY Bet v1-like 36 175 - -
Lele25g0773 188 FunFam Abscisic acid receptor PYR1 1 188 - -
Lele25g0773 188 Pfam Polyketide cyclase / dehydrase and lipid transport 41 175 IPR019587 -
Lele25g0773 188 PANTHER - 35 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0773 Lele-ChrLele25 4928598 4929164 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0773 25 4928598 4929164 Lele01g0771 01 4470160 4470723 CCT
Lele25g0773 25 4928598 4929164 Lele02g0748 02 4505877 4506440 CCT
Lele25g0773 25 4928598 4929164 Lele03g0765 03 4464878 4468351 CCT
Lele25g0773 25 4928598 4929164 Lele04g0766 04 4663881 4664444 CCT
Lele25g0773 25 4928598 4929164 Lele27g1302 27 19756286 19756960 hybridization