Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0772 ATGGGCAGGAAGTGCTCGTATTGTGGAAACCTTGGTCACAATTCAAGGACCTGTAATATTGTTCAGAGAGGTGGCTTTGATGGTGGCCTCAAGATCTTTGGAGTGCAAATTGATCCTTCACCTTCACCTCTTCTTCTTCTTCCTCCTCCTTCTCCGTCTTCACCTACTAATAATTACGGTTCTGGCATCAAAAGAAGTTTCAGCTTGAACTGCTTTCTGTCTTCCCAGGACACCTTCATATCTACCACACCTTCGTCTTCGTCTTCGTCTTCCTCCTCCTCACGTTCTCTGCTTGAACCCAACGACAATTCGGATCAGAAAATGTCTGATTCTTATTTAACCGGCAGAACCCACGAAAGGAAGAATAAAGGAGTGCCATGGACGGAGGAGGAGCACCAGATATTTCTGATGGGGCTGAAGAAGCTGGGCAAGGGTGACTGGAAAGGCATCTCTAAGAATTATGTGACAACAAGAACACCAACCCAAGTGGCCAGCCATGCACAGAAATATTTCCTCCGTCAGAATCACTCCAATAAAAGAAAGCGCTATCAAACCCTCCTTGATGTGGAGGGACAAAGTAATAACACAGTCGAACCAGTAACAAGTTCTTGCTTTTCTAAGCCCATTGAAGCTGCTGGGGCTTCTGATCAGACTAGTATGAACATGGATATCTACGTCGGCAAAGCTAAATCATTGCCTCTGTTGTCCCAGGAGCACTTAAAAGAACTGGGATTCATAGTTGCTGTATTGGACAATATGGTTAAACCATGGACATGA 777 0.4505 MGRKCSYCGNLGHNSRTCNIVQRGGFDGGLKIFGVQIDPSPSPLLLLPPPSPSSPTNNYGSGIKRSFSLNCFLSSQDTFISTTPSSSSSSSSSSRSLLEPNDNSDQKMSDSYLTGRTHERKNKGVPWTEEEHQIFLMGLKKLGKGDWKGISKNYVTTRTPTQVASHAQKYFLRQNHSNKRKRYQTLLDVEGQSNNTVEPVTSSCFSKPIEAAGASDQTSMNMDIYVGKAKSLPLLSQEHLKELGFIVAVLDNMVKPWT 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0772 258 SUPERFAMILY Homeodomain-like 121 175 IPR009057 -
Lele25g0772 258 SMART sant 123 173 IPR001005 -
Lele25g0772 258 MobiDBLite consensus disorder prediction 82 111 - -
Lele25g0772 258 Pfam Myb-like DNA-binding domain 126 171 IPR001005 -
Lele25g0772 258 Gene3D - 127 177 - -
Lele25g0772 258 CDD SANT 126 171 IPR001005 -
Lele25g0772 258 FunFam transcription factor MYB1R1 125 176 - -
Lele25g0772 258 PANTHER TRANSCRIPTION FACTOR KUA1 3 206 - -
Lele25g0772 258 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 122 174 IPR006447 GO:0003677
Lele25g0772 258 ProSiteProfiles Myb-like domain profile. 119 171 IPR001005 -
Lele25g0772 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 123 175 IPR017930 -
Lele25g0772 258 ProSiteProfiles SANT domain profile. 127 175 IPR017884 -
Lele25g0772 258 MobiDBLite consensus disorder prediction 82 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0772 Lele-ChrLele25 4920841 4922145 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele25g0772 Myb_DNA-binding 8.9e-13 CL0123