Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0768 ATGATGATCCCCAATAATAGTTCTGTCCCTCATAAAGCATCGAATATCACTCCAAATGTCCAAACTCGAGAGCAGCAGAAAACCCAAACCCAGAAAAGCCCTTCAAACCACAGAAATAACGCCGCCACTAGGGTTTGCGCCGACTGTAACACAACCAGTACCCCACTTTGGAGGGGTGGCCCAAGGGGTCCCAAGTCACTGTGCAATGCGTGTGGGATTAGGCAGAGGAAGGCAAGGAGGGCATTAATGGCGGAAGCTGGAAACGGTTCTTCATTGAGTTGCAGAGTGAATAGCAAGGAGAAGAAGGCACGCGCAAACCGTTTTGTAGGATTAAAGAGTAATAAGTGCAAGGCGAGTGCAAGCAGTGAGGGAACGTCTGAGGGAGAAAGGAAGAATGTTGGTTTTAAGGATTTGGCATTTAGTTTCAGGAACAACGTGTCGGTGGTGGATCAAGTGTTTCCTCTTGACGAAGTAGCTCAAGCGGCGCTGCTTCTCATGGATTTGTCTTATGCCTCTGTTCCTATTTAG 528 0.4811 MMIPNNSSVPHKASNITPNVQTREQQKTQTQKSPSNHRNNAATRVCADCNTTSTPLWRGGPRGPKSLCNACGIRQRKARRALMAEAGNGSSLSCRVNSKEKKARANRFVGLKSNKCKASASSEGTSEGERKNVGFKDLAFSFRNNVSVVDQVFPLDEVAQAALLLMDLSYASVPI 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0768 175 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 14 171 - -
Lele25g0768 175 MobiDBLite consensus disorder prediction 1 40 - -
Lele25g0768 175 SMART GATA_3 40 92 IPR000679 GO:0006355|GO:0043565
Lele25g0768 175 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 40 81 - -
Lele25g0768 175 Gene3D - 40 131 IPR013088 GO:0006355|GO:0008270
Lele25g0768 175 ProSiteProfiles GATA-type zinc finger domain profile. 40 76 IPR000679 GO:0006355|GO:0043565
Lele25g0768 175 ProSitePatterns GATA-type zinc finger domain. 46 71 IPR000679 GO:0006355|GO:0043565
Lele25g0768 175 CDD ZnF_GATA 45 77 IPR000679 GO:0006355|GO:0043565
Lele25g0768 175 Pfam GATA zinc finger 46 79 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0768 Lele-ChrLele25 4872688 4873323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0768 37 173 C2C2-Gata Transcription Factor Family AT4G26150 44.099 1.28e-22 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lele25g0768 GATA 1.9e-16 CL0167