Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0766 ATGTTCTTCACTGAGGATCTCTGGTCGTTGCTCCAGCTTGAGCGTCCTTTAGGAAAATATCGCTCTTCAGGATCGCTGTTCCAGTATTTACGTGAAACCATGACGAACTCAAGCTGCGGAGGGGCCGACTTCGAGCTCTGCCGAGACGACTCTGCTGCATTCGTCCTCAAGTTTGTGGCGATCGCATCCATACTCATCGCGGGGATGATCGGAGTCGCCTTACCTCTTTTCGTAAAACATCGGTGTAATCTCCGCACAGACGGCAGCCTCTTCGTTACCGCGAAGGCATTCGCGGCGGGAGTGATTCTGGCCACCGGCTTTGTCCACATGTTATGGGGCTCGTCTGTGGCCTTTTCAAATCCCTGTTTGCCCAAGTCATGGTCAAACTTCCCCTTCACCGGTTTCTTCGCCATGATCTCAGCCCTCTTAACACTCTTGGTTGATTTCATGGGAACCCAATATTATGAACGGAAACAGGGAATCGAGCGGGCCAACGAAATCCAAGGACGGGTGGGGACGTCAGAGTCGGGCATGGAATCGGGAATAGTGCCCGTTGTTGAGGTTAGGGACACGAGTGGGAAAGTGTTTGGCGAAGAAGAAGGCGGTGGAATGCACATAGTGGGGATGCATGCACACGCCGCACACCATAGGCACAACCACCCACAAGGCCACGACGCCTGTTATGGTGGTGTTAAGGAACAGTCCCATGTCACCGGGCACGGTCATAGCCATTCCCATGGATTCGGAGACGATGAGGATGAAGACGGGGTACGCCATGTCGTCGTTTCACAGGTGTTGGAACTTGGGATCGTATCACATTCAGTTATAATCGGGATATCTCTGGGGGTGTCGCATAGCCCTTGTACCATAAGGCCGCTGATAGCAGCCCTATCATTTCATCAATTCTTTGAAGGATTCGCACTCGGAGGCTGCATCTCTCAAGCTCAATTAAAGACCTCATCAGCAACCATGATGGCCTGCTTCTTCGCCCTAACGACGCCCTTGGGCATCGGAGTAGGCACGGCGATTTCTTCAGGGTATAACCCATACAGTACAGGAGCACTGGTAACGGAAGGCATATTGGACGCTCTGTCAGCTGGGATTTTAGTGTATATGGCTTTGGTAGACCTAATAGCTGCTGATTTTCTGAGCAAGAGAATGAGCTGTAACCTCAGGCTCCAGATAGTTTCATATTGTATGCTTTTTCTTGGGGCTGGATTGATGGCTTTGCTTGCAATCTGGGCCTGA 1248 0.516 MFFTEDLWSLLQLERPLGKYRSSGSLFQYLRETMTNSSCGGADFELCRDDSAAFVLKFVAIASILIAGMIGVALPLFVKHRCNLRTDGSLFVTAKAFAAGVILATGFVHMLWGSSVAFSNPCLPKSWSNFPFTGFFAMISALLTLLVDFMGTQYYERKQGIERANEIQGRVGTSESGMESGIVPVVEVRDTSGKVFGEEEGGGMHIVGMHAHAAHHRHNHPQGHDACYGGVKEQSHVTGHGHSHSHGFGDDEDEDGVRHVVVSQVLELGIVSHSVIIGISLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQAQLKTSSATMMACFFALTTPLGIGVGTAISSGYNPYSTGALVTEGILDALSAGILVYMALVDLIAADFLSKRMSCNLRLQIVSYCMLFLGAGLMALLAIWA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0766 415 MobiDBLite consensus disorder prediction 234 254 - -
Lele25g0766 415 MobiDBLite consensus disorder prediction 237 254 - -
Lele25g0766 415 Pfam ZIP Zinc transporter 55 412 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele25g0766 415 PANTHER ZINC/IRON TRANSPORTER 54 410 - -
Lele25g0766 415 TIGRFAM zip: ZIP zinc/iron transport family 42 415 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0766 Lele-ChrLele25 4860504 4862675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0766 30 415 Inorganic Solute Cotransporters AT1G10970 69.251 7.74e-170 478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0766 25 4860504 4862675 Lele27g1309 27 19820297 19822830 hybridization
Lele25g0766 25 4860504 4862675 Lele28g0762 28 4844168 4846318 hybridization