Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0744 ATGGACGGAGGTGCTCCCTACAATCCTCGTACGGTCGAAGAGGTCTTCAGGGATTTCAAGGGTCGCCGTGCCGGCATGATTAAGGCCCTCACCACCGATGTTGAAGAGTTCTATCAACAGTGTGATCCTGAGAAGGAGAACCTGTGCCTTTATGGATTTCCTAGTGAGCAGTGGGAAGTCAATCTTCCCGCCGAGGAGGTGCCTCCAGAACTTCCAGAACCTGCGCTGGGTATTAACTTTGCCAGAGATGGGATGCAAGAAAAAGACTGGCTATCTTTGGTTGCTGTTCACAGTGATGCATGGCTACTTGCCGTAGCCTTTTATTTTGGTGCTAGATTTGGATTTGATAAGGCTGATAGGAAGCGATTGTTTAATATGATAAATGATCTTCCAACAATATTTGAGGTTGTCACTGGGATGGCCAAGAAACAAGGGAAGGAGAAGTCATCAGTTTCGAACCATAGCAGTAACAAATCCAAATCAAACTCAAAGAGAGAATCTGAATCTCAAGGAAAGTATTCAAAAGCAATGCAATCAAAGGATGAAGATGAGGAGGGTTTGGATGAAGAAGACGAGGAGGAGCACGGAGAGACACTTTGTGGAGCATGTGGAGAGAATTATGCAGCTGATGAGTTCTGGATTTGCTGTGACATCTGTGAGAAGTGGTTTCATGGGAAGTGTGTGAAGATCACTCCTGCAAGGGCTGAACATATCAAGCAGTACAAATGTCCGTCCTGTAGCAACAAGAGAGCTCGACCTTGA 762 0.4593 MDGGAPYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGKEKSSVSNHSSNKSKSNSKRESESQGKYSKAMQSKDEDEEGLDEEDEEEHGETLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0744 253 Pfam PHD-finger 200 249 IPR019787 -
Lele25g0744 253 ProSiteProfiles Zinc finger PHD-type profile. 197 249 IPR019787 -
Lele25g0744 253 ProSitePatterns Zinc finger PHD-type signature. 200 246 IPR019786 -
Lele25g0744 253 Pfam Alfin 11 139 IPR021998 GO:0006355|GO:0042393
Lele25g0744 253 CDD PHD_AL_plant 199 249 IPR044104 -
Lele25g0744 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 248 IPR013083 -
Lele25g0744 253 SUPERFAMILY FYVE/PHD zinc finger 189 250 IPR011011 -
Lele25g0744 253 MobiDBLite consensus disorder prediction 145 193 - -
Lele25g0744 253 FunFam PHD finger alfin-like protein 192 248 - -
Lele25g0744 253 SMART PHD_3 199 247 IPR001965 -
Lele25g0744 253 MobiDBLite consensus disorder prediction 159 182 - -
Lele25g0744 253 PANTHER CPG BINDING PROTEIN 8 252 IPR045104 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0744 Lele-ChrLele25 4712540 4714487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0744 1 252 Alfin-like Transcription Factor Family AT3G42790 79.051 3.41e-130 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Lele25g0744 Alfin 4.9e-70 No_clan