Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0743 ATGGGAGACCCCTGGACTATTGTTCCGTACAATGACCCCTTCGATTTCCCATTACCCCATGACATCCTCGATTTCCAGGATCATCATATTCCACCATCTGCAGGTCCATCCATTGAGCACGATGCTTCTTCGTTCCCACTACAAAATGATGCATTTTTTCAGGGTAATGATCCAAATTCCGGTCAATTTTGGTTAGCTTGCCACGAACAACTAGTGACCGAGTTTCAACCTGTTGGAAAATCGATCAGTTTTTGCAGCAGAAGTATAGAGGATGTCAAGAATTTTATAAGGCAGTACAGCGCGGAGAAAAATGCAGCAGGCTACTTCACTTTGCCAGATCCACTCTCAGCTTATTATGAAGCCCTCTGCATTGGAATGGAATGGAATGAAGATTTAAGCGACGAATTCCTCGACACCAACGCTGATAATTCAGGGGGCGCATCTGATGAGACCGAGGACTTGGATAGGACTGCTAGGGCTAGCCTTGCAACTCAGAGGGAGAGAGCGGGGAAGATGAAGCTGAGTGATTTCAAGGAAGTGTTTCATCTACCTATTGAAGAAGCAGCAAGGCAAGTAAACTTATGTCCTACAGTTGTGAAGAAGATATGCCGTAAAGAAGGGTTACCCAGATGGCCACACAGAAAGATAAAGAGCATAGTGAAGAAGATGGCCATACTGAGAGGGAGTTTAAACTCGGCAGAGGCGGCGTCAAGGGCACAAACGGAGGCAGAAATCGCGAGACTACGTGGAGAAATATTTGAACATTGTGGCGGAATGATCCCATCTTCATTAAATTTGGATGCTTGA 807 0.456 MGDPWTIVPYNDPFDFPLPHDILDFQDHHIPPSAGPSIEHDASSFPLQNDAFFQGNDPNSGQFWLACHEQLVTEFQPVGKSISFCSRSIEDVKNFIRQYSAEKNAAGYFTLPDPLSAYYEALCIGMEWNEDLSDEFLDTNADNSGGASDETEDLDRTARASLATQRERAGKMKLSDFKEVFHLPIEEAARQVNLCPTVVKKICRKEGLPRWPHRKIKSIVKKMAILRGSLNSAEAASRAQTEAEIARLRGEIFEHCGGMIPSSLNLDA 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0743 268 PANTHER PROTEIN RKD4 58 252 IPR044607 GO:0003700
Lele25g0743 268 ProSiteProfiles RWP-RK domain profile. 159 239 IPR003035 -
Lele25g0743 268 Pfam RWP-RK domain 172 219 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0743 Lele-ChrLele25 4710532 4712087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0743 107 219 AtRKD Transcription Factor Family AT4G35590 31.667 1.14e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lele25g0743 RWP-RK 4.8e-20 No_clan