Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0740 ATGCAGAGTTTAACTTCTCCGCGGCTGTCTCGGCGATCATCCAAAGCTAGTACCAAGCACAAGCAACTAGTGGATGCACCAAGCCCTGTTCCTAGTGGATGCTGCCGAGGTTTCGGTAATGTCAAGACCACGGGACCCACTTTGTCAACCTTGCAACACCAGCAGCAGCTCCAACATTCAAAGAGATTGGAAACAAAGTGGGGTTTAGACCTGGGTTGGATAGCTTTTGTAATAGGATCTAGGTGGCAGATTTGGAGAAAGAAGTGCAGCGGCAGAAAGAGCTGTGAGTGGTATAGGAAAAGGATGGAAAGGACGCAGGAGTATATGAGATACTGCCTCCAAACAGCACAAGAGAATGGTATATTGGACCTCATCACCCACTCCAATGGTGACCCCCAACAATCCCCATTATCAGCCCCCAATGTCAACTCCGCCGCTAGTCCTTGCCACCAGCACCACCCAGATCTTGCAGCCATCGTTGATCAAGCCAAAATCAATGGATGGTACATTGATCCTGTTGAGATTCAGCTGGGGAGAAGATACGACAGGGAACAACGGCGGAGAGGTGAAGACTCTGTCGATGCAGAGGCACCGGTTTGTGCTTCAGCTGATGGGGGCATGCCTGGACCCTCCCCGCCACGCCTGGGTGGTCACCGAGCATACTACGGTCCTACCAAGATTGCAGTGGAAGTAGTGGAGGGGAAACAGAGGCCGATGGTTCCGGAGGATAGGGATGGGGAAGTGGAGGAGCTGAATCACCGATTCTGTCTTCCCATCTGTTCCACCGTCCACCTTCTCGATCTCTTCAGCAACACTCTTGATGCCCGAGTTGCTCGACAAGTTCTTCCAGGATTCTGGATGGATTCTAAGCATCGAGCTGTAAAAGGCGGTGAAGTTAGCATGACGGAGAAGAAAACAGCCAACGAAGGAGATGTGGTGGTGACTATTCCGGGCCAGCAGAATCCGAATCTTACTGGGGAGATTCAAAGCTCCAAAGTGACTGAATCTAACAATACGTCCACCGAGCACGCTAATGGGCATGCCTCTCCTGAGCCAAGGTCCAGTTCCAGCCCAAACAAGTCTCCAGAAGTTTCTGATACTACCCGAAACCTTATTCGCAGAAAGTCTCTACAAAGGTCAGCGTATTCTAAGCCTAAATCTAGATTCGTGGAACAACCTTATCCTGCTGAAGCAACAGTTTTGGAAGAGAATGTCACTTCCACTCTGCAAGAACAGCTCGCCTTTGGTTCGCCTAATAACAAATCAGCTACTGTTAATAGGACAGTGTCCATTAGTTCCGTCACTCCTAAGACGCCGTTGATGGCGTCTCCGGGGCCAGCTGGGGAAGATGAGGATGAAATCGTTTACAGGAAAGTTGAACTGAGTAAAGGGAAGCGTAAGACTGTGAAATTTAAGGCTTTGATCGAGTGTATTATGCTTGCGTGCATTACGGGAATCTTGGTTGCTAGCCTGACTGTTGAAAAATTGAAAAACGTAATGATTTGGGGGTTGGGGTTTTGGAAGTGGTGTGTACTTCTGATGGTTATCTTTTGTGGCATGTTGATTACCAGATGGGTCATGCACATTATAGTTTTCCTGATTGAAATGAACTTCTTACTGAGGAAAAAGGTTCTCTATTTTGTTCATGGACTAAAGAAAAGTGTCCAAGTCTTCATTTGGCTGGGTCTGGTTCTCCTCGCTTGGGTTCTGTTAATCAATCGCGGGGTCCGGCGATCAGAACTTGGCGCAAAAATTTTGAATGGTGTAACATGGACTCTTGTTTCTCTTCTCATTGGGTCATTCTTATGGGTGGTGAAGACGTTGCTGCTGAAGATATTAGCCTCAAATTTCCATGTCAAGTCGTTTTTTGATAGGATTCAAGAATCAATTTTCCATCAGTATGTTTTACAGAGTCTATCTGGGTCTCCATTAATAGAGGAGGCTGAGAAGATTGGTAGATCACCAAGTGTTGGCCAGGTTAGTTTCAGGAGTACAAAAGGTGAAAAAAAGGGCACAAAGAAAGAGTTCATTAATATGGCGACGTTTCACAAGATGAAACGGGAGAAAGTTTCTGCTTGGACAATGAAGATTTTGGTTGATGCAGTGGCGAATTCAAGGCTGTCCACAATCTCTAATGTGCTAGATGAGAGCTTCGACGATGGAGGACTAGAACAAACCGACAAGGAGATTACGAATGAGATGGAAGCAACTGCTGCTGCATATCAGATTTTCAGGAATGTCGCTGCCCCTGGTTGCTCGTACATAGATGAAGATGACCTCCTGAGGTTCATGATTAAGGAAGAAGTAGATATGGTATTTCCCCTATTCGAAGGATCAGAGACGGGACTAATAGACAGAAAGGCTTTGACAAAATGGGTGGTGAAGGTCTATCAGGAACGCAAGGCATTGGCACATGCCTTAAGCGACACCAAGACTGCTGTAAAGCAATTGAACAAGCTTGTGACAGGGATCCTGGTTGTTTTGATCATAATTCTGTGGCTTCTACTGATGGAGATTGCAACAACAAAAGTACTAGTGTTCATTTCATCTCAGCTAGTTGTTGCAACCTTCATGTTTGGAAATACGTGCAAAAATATATTCGAGGCTATCATATTTGTGTTTGTAATGCATCCATTTGATGTTGGCGACCGATGTGTTGTAGATGGGGTTCAGCTATTGGTTGAAGAAATGAACATCTTGACAACGGTATTCTTGAAACTTGATAATGAGAAGGTGTTCTATCCAAACTCAGTTCTGGCCACAAAACCCATTAGCAATTATTACAGGAGCCCGGATATGGGTGACACTGTAGACTTTTCAATTGACTTTATGACACCGTTGGAGAGGATTGGGGCACTGAAGGAAAAAATAAAGAGGTACTTGGAGAGAAATCCGCAACACTGGCGTCCTAATCACAATGTGATAGTGAAGGAGATAGAAAATGTGAACAAGATTAGAATAGCCCTGTATGTTACGCACACAATGAATTTTCAAGACTTCGCGGAGAAGAACAGGAGGAGAACAGAACTGGTGATGGAACTAAAGAAAATATTTGAGGAGCTCGATATTAGATACTATCTTCTTCCTCAGGCAGTTCATCTCAGCTATGTTTGA 3114 0.4538 MQSLTSPRLSRRSSKASTKHKQLVDAPSPVPSGCCRGFGNVKTTGPTLSTLQHQQQLQHSKRLETKWGLDLGWIAFVIGSRWQIWRKKCSGRKSCEWYRKRMERTQEYMRYCLQTAQENGILDLITHSNGDPQQSPLSAPNVNSAASPCHQHHPDLAAIVDQAKINGWYIDPVEIQLGRRYDREQRRRGEDSVDAEAPVCASADGGMPGPSPPRLGGHRAYYGPTKIAVEVVEGKQRPMVPEDRDGEVEELNHRFCLPICSTVHLLDLFSNTLDARVARQVLPGFWMDSKHRAVKGGEVSMTEKKTANEGDVVVTIPGQQNPNLTGEIQSSKVTESNNTSTEHANGHASPEPRSSSSPNKSPEVSDTTRNLIRRKSLQRSAYSKPKSRFVEQPYPAEATVLEENVTSTLQEQLAFGSPNNKSATVNRTVSISSVTPKTPLMASPGPAGEDEDEIVYRKVELSKGKRKTVKFKALIECIMLACITGILVASLTVEKLKNVMIWGLGFWKWCVLLMVIFCGMLITRWVMHIIVFLIEMNFLLRKKVLYFVHGLKKSVQVFIWLGLVLLAWVLLINRGVRRSELGAKILNGVTWTLVSLLIGSFLWVVKTLLLKILASNFHVKSFFDRIQESIFHQYVLQSLSGSPLIEEAEKIGRSPSVGQVSFRSTKGEKKGTKKEFINMATFHKMKREKVSAWTMKILVDAVANSRLSTISNVLDESFDDGGLEQTDKEITNEMEATAAAYQIFRNVAAPGCSYIDEDDLLRFMIKEEVDMVFPLFEGSETGLIDRKALTKWVVKVYQERKALAHALSDTKTAVKQLNKLVTGILVVLIIILWLLLMEIATTKVLVFISSQLVVATFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVVDGVQLLVEEMNILTTVFLKLDNEKVFYPNSVLATKPISNYYRSPDMGDTVDFSIDFMTPLERIGALKEKIKRYLERNPQHWRPNHNVIVKEIENVNKIRIALYVTHTMNFQDFAEKNRRRTELVMELKKIFEELDIRYYLLPQAVHLSYV 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0740 1037 MobiDBLite consensus disorder prediction 297 388 - -
Lele25g0740 1037 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 298 1034 IPR016688 -
Lele25g0740 1037 MobiDBLite consensus disorder prediction 1 28 - -
Lele25g0740 1037 MobiDBLite consensus disorder prediction 127 148 - -
Lele25g0740 1037 FunFam Predicted mechanosensitive ion channel 878 927 - -
Lele25g0740 1037 MobiDBLite consensus disorder prediction 127 150 - -
Lele25g0740 1037 MobiDBLite consensus disorder prediction 183 210 - -
Lele25g0740 1037 Pfam Mechanosensitive ion channel 820 1024 IPR006685 GO:0016020|GO:0055085
Lele25g0740 1037 Gene3D - 878 927 IPR023408 -
Lele25g0740 1037 SUPERFAMILY Sm-like ribonucleoproteins 868 927 IPR010920 -
Lele25g0740 1037 MobiDBLite consensus disorder prediction 313 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0740 Lele-ChrLele25 4681316 4690526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0740 301 1035 Mechanosensitive Ion Channel Family AT5G12080 58.556 0.0 858