Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0736 ATGGGGAGGAGTCCCAGTTGCTATGGAGAAGAAGGACTGAACAAAGGAGCATGGACTGCTCAAGAGGACGAGTTGCTCACTTCTTACATTATGGCCCACGGGGATGGCAAGTGGACCCACATCCCTATAAGAGCTGGCTTGAATAGGAGTGGGAAAAGCTGTAGGCTTCGATGGTTGAACTATCTCAGGCCTAATATTAAGAGAGGTAACATCACCCAAGATGAAGAAGACCTCATTATCAGACTTCATAAACTTCTTGGAAACAGATGGTCTCTTATGGCTGGAAGGCTACCGGGAAGAACAGACAATGAAATCAAGAACTACTGGAACACTACTTTGGCAAAGAAGCTTAGAACACAATCAGGCGCAACTTCTGAACAACATGAATCCAGCAAATCAAACTCATCTGATGATATCACTCGGCCACCAGTAATCCAAACGAAGGCCCGAAGATTAAAAAACGTGGCTATCCAACATTCCCCTAAAAATTATCCTGAGGAAACGTCCGCCGTCAACTCACTAGCTTCCAACCAGTTAGGGTTTAACGAAGCTCATCAGCTAGCTCCCCAGTTCACAAACCAGTTTCTGCAGGCTGTAGATGAATATCAGAATTCAGATGTGAACTTGTTGGGTCCTGAAAGGAATATTGATGAGTTTCAAGATCAAATGAATGCAGTAGATTTTTTCAGAGAGTTTAACCTTGACAATAATAGCATGGGCATGGGCATGGATGCTCAAGCAGACGAGTTCCCACCTATCGACGAACTTGCCAATTGTGGGACATGTAATGATGGATTCAGGAACATTGGCGCAATGGATCTGGATTTAATGACATTCATGTTGGATTCTGGCTCTGTGGATTGGCCCTGA 870 0.4448 MGRSPSCYGEEGLNKGAWTAQEDELLTSYIMAHGDGKWTHIPIRAGLNRSGKSCRLRWLNYLRPNIKRGNITQDEEDLIIRLHKLLGNRWSLMAGRLPGRTDNEIKNYWNTTLAKKLRTQSGATSEQHESSKSNSSDDITRPPVIQTKARRLKNVAIQHSPKNYPEETSAVNSLASNQLGFNEAHQLAPQFTNQFLQAVDEYQNSDVNLLGPERNIDEFQDQMNAVDFFREFNLDNNSMGMGMDAQADEFPPIDELANCGTCNDGFRNIGAMDLDLMTFMLDSGSVDWP 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0736 289 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Lele25g0736 289 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Lele25g0736 289 Gene3D - 15 67 - -
Lele25g0736 289 FunFam Transcription factor TT2 71 141 - -
Lele25g0736 289 Gene3D - 70 141 - -
Lele25g0736 289 SMART sant 14 64 IPR001005 -
Lele25g0736 289 SMART sant 67 115 IPR001005 -
Lele25g0736 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Lele25g0736 289 CDD SANT 72 113 IPR001005 -
Lele25g0736 289 MobiDBLite consensus disorder prediction 119 142 - -
Lele25g0736 289 MobiDBLite consensus disorder prediction 119 143 - -
Lele25g0736 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele25g0736 289 CDD SANT 17 62 IPR001005 -
Lele25g0736 289 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Lele25g0736 289 FunFam Myb transcription factor 15 67 - -
Lele25g0736 289 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 175 - -
Lele25g0736 289 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele25g0736 289 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0736 Lele-ChrLele25 4640869 4641919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0736 1 162 MYB Transcription Factor Family AT4G38620 53.086 3.63e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele25g0736 Myb_DNA-binding 8.8e-15 CL0123