Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0735 ATGGGGAGAGTTCCATGGTGGTCGGAGAAAGGAGAAGGACTGAAAAGAGGGGCATGGACTGCTCAAGAGGACAAGTTACTCACTTCTTACATTATGGCCCACGGCGAAGGCAAATGGACCCACGTCCCCAAAGCGGCTGGCTTGAACAGGGGTGGCAAAAGCTGTAGACTCAGATGGTTGAACTATCTCAGGCCAGACATTAAGCGAGGAAACATCACTCGCGATGAAGAAGATCTCATCATTAGGCTCCATAAACTTGTTGGCAACAGATGGTCTCTCATAGCTGGAAGGATACCTGGACGAACAGACAATGAAATAAAAAACTACTGGAACACCACTCTGTCAAAGAAGCTTAGAACACAATCATGTGCAATGAGGACTCAACAACATACAACGAACAAGTCAACAGCAAGGAAGCTGTCACCAGTCATCCAAACAAAGCCTTGGAAGTGCAAAAACGTGGTTATCCGACATCCCCCATGTCCCAAGGAAAATCTGCTGCTTTCAAACCAGATAGAGTTTCAGGAAGCAGACCTAACTAATCAATCTCAAAACTCACCTCCTCCGGAGTCTCGAGTTAATAATGTCCATGAACATCATCAGTTCAATCAAACTGACAACTTTGAAGGGAATTTGTTGAGCCGTGGAAACAATGTTCCTTGCAATGATCAGTGCCAACCTATTGACCAAGTTATGTTGAATGGTTGGACCACAAGTTGCTTCGAGGTCGACATCAATAGTATTGCCACGTGGGAGATGGATTCTTTGGCCCTCCTCCTGGAATCTGAGGTTTGGGAAGCGAGTCCCGTGAATTGA 816 0.4608 MGRVPWWSEKGEGLKRGAWTAQEDKLLTSYIMAHGEGKWTHVPKAAGLNRGGKSCRLRWLNYLRPDIKRGNITRDEEDLIIRLHKLVGNRWSLIAGRIPGRTDNEIKNYWNTTLSKKLRTQSCAMRTQQHTTNKSTARKLSPVIQTKPWKCKNVVIRHPPCPKENLLLSNQIEFQEADLTNQSQNSPPPESRVNNVHEHHQFNQTDNFEGNLLSRGNNVPCNDQCQPIDQVMLNGWTTSCFEVDINSIATWEMDSLALLLESEVWEASPVN 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0735 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Lele25g0735 271 CDD SANT 73 114 IPR001005 -
Lele25g0735 271 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 191 - -
Lele25g0735 271 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Lele25g0735 271 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Lele25g0735 271 CDD SANT 18 63 IPR001005 -
Lele25g0735 271 FunFam MYB-related transcription factor 15 68 - -
Lele25g0735 271 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Lele25g0735 271 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Lele25g0735 271 SMART sant 15 65 IPR001005 -
Lele25g0735 271 SMART sant 68 116 IPR001005 -
Lele25g0735 271 Gene3D - 16 68 - -
Lele25g0735 271 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Lele25g0735 271 Gene3D - 72 142 - -
Lele25g0735 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0735 Lele-ChrLele25 4635689 4636689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0735 13 129 MYB Transcription Factor Family AT3G13540 68.376 1.72e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele25g0735 Myb_DNA-binding 6.5e-14 CL0123