Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0734 ATGAGTAGCCTGGTACTACATTACAACAACGTAAAGAAAATGTGCACTGGTCTGAGAACCAACCTGCATTCAATAGATGCTTCCCTCAGTGGGGTTGTCCCATTGTTGGAACGTGAAAGCCGAAGGAAGTCGCAAAACAGAGAAGAGCAACAAACTTTCAAAACTAAGGCCGAAAGTCTGAGGAGATGTGGGAAATCGTGTAGGCTTCGGTGGATGAATTACCTGAGGCCAGATATCAAAAGAGGAAACATCACTGAAGACGAAGAAGATCTCATTCTCAGGCTCCACAAGCTCTTGGGCAACAGATGGTCACTGATAGCGGGAAGACTTCCGGGGCGAACAGACAATGAAATCAAGAACTACTGGAACACCAACTTGGCCAAGAAGGAGCAAGAGAAGCGATCCCAAGATATATCTCAAAATGGGAAAAGTGAAATTGCAGAATCAAGAGTTTCCCAGGAGGCTTTGGAGACGGTTCCTCAAAGCATTCACGTGGTATTAGACAAGTCAACTCCGATGGAACCCAACACTGCTGAGTGTTATAGTCAATCGTCGCCGGCGGAAGAAAACGTGGATGGGGCTCTGAAGGATTTTGATTTCGAGGACGTGGAGTTTTTGGAGTTTCTAGACTTGGATTCTACTGGACTTGCGGATTTTGACATGTTGATTAACATGGACGATTGGCAGCAAGAAGGAAGGCAGAGTGATTCTCAGTCATTTTCATTTTCTGCGGAAACAAATGCTGCGCAGGAGAACCAGAATGTCTCCCGTTAA 774 0.4574 MSSLVLHYNNVKKMCTGLRTNLHSIDASLSGVVPLLERESRRKSQNREEQQTFKTKAESLRRCGKSCRLRWMNYLRPDIKRGNITEDEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLAKKEQEKRSQDISQNGKSEIAESRVSQEALETVPQSIHVVLDKSTPMEPNTAECYSQSSPAEENVDGALKDFDFEDVEFLEFLDLDSTGLADFDMLINMDDWQQEGRQSDSQSFSFSAETNAAQENQNVSR 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0734 257 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 46 154 - -
Lele25g0734 257 MobiDBLite consensus disorder prediction 129 153 - -
Lele25g0734 257 CDD SANT 85 126 IPR001005 -
Lele25g0734 257 SMART sant 80 128 IPR001005 -
Lele25g0734 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 130 IPR017930 -
Lele25g0734 257 MobiDBLite consensus disorder prediction 230 257 - -
Lele25g0734 257 Gene3D - 36 80 - -
Lele25g0734 257 Gene3D - 85 154 - -
Lele25g0734 257 ProSiteProfiles Myb-like domain profile. 76 126 IPR001005 -
Lele25g0734 257 Pfam Myb-like DNA-binding domain 81 126 IPR001005 -
Lele25g0734 257 SUPERFAMILY Homeodomain-like 61 129 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0734 Lele-ChrLele25 4631265 4632616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0734 56 129 MYB Transcription Factor Family AT3G13540 83.784 5.45e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele25g0734 Myb_DNA-binding 2.6e-14 CL0123