Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0727 ATGACGGTTTATCTAATTAGACATTCTTTCTCTCCTCAACCTGGGATCTGCTTCAGTTATGGAAGAAACCGCGATGTTCACGGAGTTGACTTCATTTCTCGACTGCCGGTGGAACAACATCGCGGCTTTAGACGCCGGAGCATTCTCCGGCCACATATGGGTCCAAAATTTGTGGTATTCAGCTCCCTCGAAACTAGAATTGACTCCGCCGAAACAACCTTGCAAGCGCAGGAGAAGAGCAAAGATTCGCCCGTTTTACTAGATGTCACTGGAATGATGTGTGGAGCTTGCGTCTCACGAGTTAAAAACATTTTGTCTGCTGATGAGCGAGTTGACTCGGTTGTCGTTAACATGTTGACTGAGACCGCCGCCGTTAAGTTGAAAAAACTCGACGTAGCCCCGGCTTCAGTTCTGGAGACCGATTATCCCGGAACTGTAGCCGAGGCCCTTGCCGGGAGATTGACCGAATGTGGTTTTCCCACAAAACGGAGGGTTTCGGGTACAGGAATGGCGGAAAATGTGAGGAAGTGGAAGGATTTGGCGAAGAAGAAGAAGGAGCTGCTTGCGAAGAGTCGAAACCGTGTTGCCTTTGCTTGGACTTTGGTGGCGTTGTGCTGTGGATCGCATGCTTCGCATATTTTACATTCCTTAGGAATCCACATTGCTCATGGACCTGTATGGGATGCTCTTCATAATTCATATGTGAAAGGTGGTATAGCTTTGGCAGCTCTGTTGGGACCAGGTCGAGAGTTACTGGTCGATGGTCTGAGGGCATTCAGAAAAGGATCGCCAAATATGAACTCTCTTGTGGGATTTGGTTCTATTGCTGCCTTCATCATCAGTTCGATCTCACTACTTAATCCTGGGCTGGCATGGGATGCATCATTCTTTGATGAGCCGGTCATGCTTCTAGGTATTGTACTTCTAGGACGATCTTTGGAAGAGAAGGCGAGAATTCAGGCATCTAGTGATATGAATGAACTTCTTTCACTGATTTCAACTCAATCAAGACTTGTGATTACTTCCTCAGAAGGTGCTCCATCTGCAGCCAGTGTGCTTTGCTCTGATGCGATCTGTGTTGAAGTCCCAACAGACAATATTCGAGTTGGTGATTCAGTGTTGGTGTTGCCTGGAGAAACTATTCCTATAGATGGAAGAGTCATTTCTGGAAGAAGTGTTGTGGATGAATCCATGCTTACAGGAGAATCACTTCCTGTGTATAAAGAAGAAGGCTTCACAGTTTCAGCGGGAACTATAAATTGGGATGGTCCTTTAAGGATTGAAGCTTCTTCAACCGGCTCCAACACAATGATATCCAAAATTGTCTGCATGGTTGAGGATGCTCAATCACGTGAAGCACCTGTACAAAGGCTTGCAGATTCAATAGCTGGCCCATTTGTATACAGTGTTATGACTCTATCAGCAGCAACATTTGCATTTTGGTATTTAATTGGGTCACATGTTTTTCCAGATGTTTTACTTAATGATATTGCGGGCCCAGAAGGAGATCCTTTGCTTTTGAGCTTGAAACTTTCTGTAAATGTCTTGGTGGTATCTTGCCCTTGTGCACTGGGCCTTGCCACACCCACAGCAATCCTGGTTGGCACCTCACTGGGTGCAAGAAAAGGACTTCTCATTAGAGGTGGAGATGTGTTGGAACGCTTAGCTAGCATTAACCATGTTGCTCTAGACAAGACAGGAACCATCACCAGAGGAAAACCAGTTGTCTCTGCTGTGGGTTCTTTTAATTATGAGGGATCAGAAATTCTTCAGATCGCTGCTGCAGTAGAGAAAACAGCATCTCATCCAATAGCAAAGGCTATTATCAATAAAGCTGAGTCATTAGAATTGGTCCTTCCTGTCACAAAAGGGCAGTTAGTTGAACCGGGTTTTGGAACCTTGGCAGAAATTGATGGACGGTTGGTTGCAGTTGGTTCCTTGGAATGGGTACATAAGCGTTTCCAGACAAGAATGAACTCAACTGATTTGATGAATCTGGATCATGTTTTGATGAATAAATCATCAAATGATATGCCTTCAAACTATTCAAAAACCATTGTTTATGTTGGACGTGAAGGAGAAGGCATCATCGGTGCTATTGCCATATCTGACATTTTACGTGATGATGCTAAATCTACAGTAATGAGGCTCCAGCAGAAGGGTATTAAAACAGTCCTCTTATCAGGGGACAGGGAAGAGGCAGTGGCAACAATTGCTGAGACAGTTGGGATAGAAAGTAGTCTAGTCAAAGCATCAATGACCCCACAGCAGAAATCTAAATTCATTTTATCTCTTAAAGCTGCTGGACATTGTGTTGCAATGGTAGGTGATGGGATAAATGATGCACCGTCTTTGGCTGTGGCTGATGTTGGGATTGCTCTGCAGAATGAAGCTCAAGAAAATGCTGCATCAGATGCAGCTTCCATTATACTTATTAGGAACAAAATTTCGCAAGTTGTAGATGCCCTAGACCTTGCACAGGCAACCATGGCGAAAGTGTACCAGAATTTGTCATGGGCAGTTGCTTATAATGTTGTTGCCATTCCCATTGCTGCTGGTGTGTTACTTCCCCAATTTGATTTTGCTATGACACCTTCACTTTCAGGAGGATTGATGGCTTTGAGCTCCATTTTCGTGGTTGGCAACTCATTGCTTCTACAGCTTCATGAGTTCAAAAACAAGCACTAG 2688 0.4449 MTVYLIRHSFSPQPGICFSYGRNRDVHGVDFISRLPVEQHRGFRRRSILRPHMGPKFVVFSSLETRIDSAETTLQAQEKSKDSPVLLDVTGMMCGACVSRVKNILSADERVDSVVVNMLTETAAVKLKKLDVAPASVLETDYPGTVAEALAGRLTECGFPTKRRVSGTGMAENVRKWKDLAKKKKELLAKSRNRVAFAWTLVALCCGSHASHILHSLGIHIAHGPVWDALHNSYVKGGIALAALLGPGRELLVDGLRAFRKGSPNMNSLVGFGSIAAFIISSISLLNPGLAWDASFFDEPVMLLGIVLLGRSLEEKARIQASSDMNELLSLISTQSRLVITSSEGAPSAASVLCSDAICVEVPTDNIRVGDSVLVLPGETIPIDGRVISGRSVVDESMLTGESLPVYKEEGFTVSAGTINWDGPLRIEASSTGSNTMISKIVCMVEDAQSREAPVQRLADSIAGPFVYSVMTLSAATFAFWYLIGSHVFPDVLLNDIAGPEGDPLLLSLKLSVNVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLASINHVALDKTGTITRGKPVVSAVGSFNYEGSEILQIAAAVEKTASHPIAKAIINKAESLELVLPVTKGQLVEPGFGTLAEIDGRLVAVGSLEWVHKRFQTRMNSTDLMNLDHVLMNKSSNDMPSNYSKTIVYVGREGEGIIGAIAISDILRDDAKSTVMRLQQKGIKTVLLSGDREEAVATIAETVGIESSLVKASMTPQQKSKFILSLKAAGHCVAMVGDGINDAPSLAVADVGIALQNEAQENAASDAASIILIRNKISQVVDALDLAQATMAKVYQNLSWAVAYNVVAIPIAAGVLLPQFDFAMTPSLSGGLMALSSIFVVGNSLLLQLHEFKNKH 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0727 895 SUPERFAMILY HMA, heavy metal-associated domain 85 137 IPR036163 GO:0046872
Lele25g0727 895 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 266 886 IPR027256 GO:0006812|GO:0016020|GO:0019829
Lele25g0727 895 Pfam E1-E2 ATPase 347 542 - -
Lele25g0727 895 Gene3D - 573 706 IPR023299 GO:0000166
Lele25g0727 895 PANTHER ATP7, ISOFORM B 73 888 - -
Lele25g0727 895 SUPERFAMILY HAD-like 561 883 IPR036412 -
Lele25g0727 895 PRINTS P-type cation-transporting ATPase superfamily signature 720 730 - -
Lele25g0727 895 PRINTS P-type cation-transporting ATPase superfamily signature 395 409 - -
Lele25g0727 895 PRINTS P-type cation-transporting ATPase superfamily signature 775 794 - -
Lele25g0727 895 PRINTS P-type cation-transporting ATPase superfamily signature 562 576 - -
Lele25g0727 895 PRINTS P-type cation-transporting ATPase superfamily signature 698 709 - -
Lele25g0727 895 ProSiteProfiles Heavy-metal-associated domain profile. 84 163 IPR006121 GO:0046872
Lele25g0727 895 FunFam Copper-transporting ATPase 1, putative 318 449 - -
Lele25g0727 895 FunFam Copper-transporting ATPase PAA2, chloroplastic 573 706 - -
Lele25g0727 895 Gene3D - 318 449 - -
Lele25g0727 895 Coils Coil 60 80 - -
Lele25g0727 895 Gene3D - 76 165 - -
Lele25g0727 895 SFLD Haloacid Dehalogenase 545 828 - -
Lele25g0727 895 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 348 867 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele25g0727 895 SFLD p-type atpase 545 828 IPR044492 -
Lele25g0727 895 SUPERFAMILY Calcium ATPase, transduction domain A 355 445 IPR008250 -
Lele25g0727 895 Pfam Heavy-metal-associated domain 87 132 IPR006121 GO:0046872
Lele25g0727 895 ProSitePatterns E1-E2 ATPases phosphorylation site. 564 570 IPR018303 -
Lele25g0727 895 Pfam haloacid dehalogenase-like hydrolase 558 789 - -
Lele25g0727 895 Gene3D - 553 826 IPR023214 -
Lele25g0727 895 SUPERFAMILY Calcium ATPase, transmembrane domain M 295 556 IPR023298 -
Lele25g0727 895 CDD HMA 87 160 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0727 Lele-ChrLele25 4586896 4594852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0727 248 894 Primary Pumps ATPases AT1G63440 35.855 1.16e-116 378