Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0726 ATGTGTAGATTGTACCAGCTTTCATCAAGTTGCTTTGTCTTGTATAGAAACTGGGGGGAAAATAATAATAATAAAACTATCACTTATTCTTTGGAGAAATTGATGCAGCATGTGGTGGCTTCCTTGTCTTTTGCTTATCCTACGGGGCCCGCTCGGGGCTGTCAGACCCATAGGGGATACGAGCCCCATTCACCTTCCCGAGTCTATCTAGAGGCTGTTCTTCTTGATTGTACGGACTGGATCCTTACGACGAGAGACGAAGACAGGTCTACGGAGAGAGCAGTTATGGCATTTCGGTTTGGACTTGTTCTTCTGGCTTTTGTCATTTGTTTGAACTTCAACTCGGTGGATTCAGACGATGGAGCAACATTACTAGATATAAAGAAGTCATTTAGGGATGTGGAAAATGTTCTATGTGACTGGACAGACCCTCCATCTTCCGATTATTGTGTCTGGAGAGGGATCATATGCGATAATGTCACCTTCAATGTTGTTGCACTAAACCTCTCAAGTTTGAATCTGGAAGGTGAAATCTCACCTGCTATAGGGGGCCTTAAGAGCTTGGTCTCTATCGACCTTAGGGGGAACCGATTATCTGGCCAGATACCAGATGAGATTGGTGACTGTTCCTCTTTGAAGAGCTTGGACTTATCATTTAATGAAATACGGGGAGACATACCATTTTCGATTTCAAAGTTGAAACAACTGGAAAATCTAATTTTGAAAAATAACCAGTTAATAGGACAAATTCCTTCTACATTGTCTCAGATTCCCAACTTGAAGATTCTGGACTTGGCTCAAAATAATCTTAGCGGTGAAATACCAAGGCTTATCTACTGGAACGAAGTCTTGCAATATCTTGGCTTGCGAGGAAACAATTTAGGGGGTTCACTCTCTCCTGATATGTGCCAATTAACTGGACTATGGTATTTTGATGTGAGGAACAACAGCTTGACTGGCAGCATTCCTGAGAGTATAGGCAACTGTACTGCCTTCCAGGTCTTGGATTTATCCTACAACCAGCTGACTGGAAAGATACCATTCAACATTGGGTTTCTTCAAGTAGCAACATTGTCATTGCAAGGCAATAAACTATTTGGACCTATTCCATCAGTGATTGGGCTGATGCAAGCACTTGCTGTATTAGATTTGAGTTGCAACAAGCTAAGTGGACCAATCCCTCCCATCTTGGGAAATTTGACATACACTGAAAAATTGTATTTGCACGGGAATAAACTGTCTGGCTACATTCCCCCAGAGCTCGGAAATATGACAAAGCTTCACTATTTGGAATTGAATGATAACCATTTGAGTGGACGTATCCCACCCGAGCTTGGAAAGCTTACTGATCTGTTTGACTTAAATGTTGCTAACAACAACCTTGAAGGGCCAATTCCTGATAATATTAGCTCATGCAAAAATCTCAACAGCCTCAATGTGCAGGGAAACAAGTTAAATGGAACAATCCCCCCAACTTTTCAGAGCTTGGAGAGTATGACTTATCTGAACCTTTCCTCCAACAAGCTTCGAGGCCCCATTCCAATTGAGCTGTCAAGGATTGGTAATTTGGATACCTTGGATATTTCAAATAATAATATAAGTGGTTCCATTCCTTCTTCCCTTGGTGACTTGGAACATCTTCTGAAGCTGAATCTGAGTAGAAATCATCTAACTGGATTTATTCCAGCAGAGTTTGGTAATTTAAGAAGTGTTATGGATATAGATCTTTCAAATAACCAACTCTCTGGATTGATTCCTGAAGAACTTAGTCAGCTGCAGAATATGCAATCACTGAGATTGGAAAACAACAATCTATCCGGGGATGTGACTTCTCTTATAAATTGCCTTAGCCTTTCTTTGCTCAATGTGTCCTATAACAACCTAGTTGGTGTAATTCCCACAAGCAATAATTTCTCCAGGTTCTCTCCAGACAGTTTCATTGGAAACTCTGGTCTCTGTGGCTATTGGATGACTTCACCTTGTCATAGATCTCATCCCACAGAGCGAGTTACGCTATCTAAGGCAGCCATCCTAGGAATTGCTCTTGGTGCCCTTGTGATTCTTCTTATGATATTACTAGCAGCGTGTCGGCCATACAATCCATCCCCATTTCCAGATGGATCACTTGACAAGCCAGTTACTTATTCACCGCCAAAGCTAGTGATTCTTCATATGAACATGGCTCTTCACGTTTATGAGGATATTATGAGGATGACTGAAAATCTGAGTGAGAAGTACATAATTGGAGGTGGTGCATCAAGCAAAGTTTATAAATGCGTCCTTAAGAACTGCAAGCCAGTAGCCATCAAGAAGCTCCATTCTCACTATCCCCAAAGCTTGAAAGAATTTGAGACAGAACTTGAGACGGTTGGTAGCATCAAGCACCGAAACCTGGTTAGTCTCCAAGGCTATTCCTTGTCCCCTTATGGGATCCTTCTCTTCTATGACTACATGGAAAATGGCAGTCTATGGGATCTTCTTCACGGAGCTTCTAAAAAGAAAAAGCTTGACTGGGACCTTCGTTTAAAAATAGCACTAGGAGCAGCACAAGGGCTTGCTTATCTACACCATGATTGTTGCCCCCGGATCATCCACAGGGATGTGAAATCATCAAATATTCTGTTGGACAAGGACTTTGAGGCCCATCTCACTGACTTTGGCATTGCTAAAAGTCTATGCCCCTCCAAATCCCACACTTCAACTTACATAATGGGGACAATCGGTTATATAGACCCTGAATATGCTCGAACTTCCCGTCTCACTGAGAAGTCTGATGTTTATAGTTTTGGCATCGTTTTACTTGAGTTGCTCACTGGCAGGAAAGCTGTGGACAATGAATCAAATCTCCATCACCTGATTTTGTCAAAGACAGCAAACAATGCTGTGATGGAGACGGTTGATCCTGATATTACTGCCTCATGTAAGGATATGGGAGCAGTAAAGAAGGTATTTCAGCTAGCCCTTTTGTGCACAAAGAGACAGCCAGTTGATAGGCCGACAATGCACGAGGTGATGCGCGTGCTGGGAAGCCTTGTGCCCCCCACCTCCCCACCAAAACAAGTAGCCCCACCTCCTGCAGCTTCTGCTCTGCTTCCATCTGCAAAGGTGCCATCGTGCTATATGGATGAGTATGCAAATCTGAAGACTCCACACTTGGTGAACTGCCCCTCCATGAGCACCTCTGATGCCCAGCTCTTCCTCAAATTTGGGGAGGTAATTTCTCAGAACAGTGAATGA 3237 0.4291 MCRLYQLSSSCFVLYRNWGENNNNKTITYSLEKLMQHVVASLSFAYPTGPARGCQTHRGYEPHSPSRVYLEAVLLDCTDWILTTRDEDRSTERAVMAFRFGLVLLAFVICLNFNSVDSDDGATLLDIKKSFRDVENVLCDWTDPPSSDYCVWRGIICDNVTFNVVALNLSSLNLEGEISPAIGGLKSLVSIDLRGNRLSGQIPDEIGDCSSLKSLDLSFNEIRGDIPFSISKLKQLENLILKNNQLIGQIPSTLSQIPNLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLGGSLSPDMCQLTGLWYFDVRNNSLTGSIPESIGNCTAFQVLDLSYNQLTGKIPFNIGFLQVATLSLQGNKLFGPIPSVIGLMQALAVLDLSCNKLSGPIPPILGNLTYTEKLYLHGNKLSGYIPPELGNMTKLHYLELNDNHLSGRIPPELGKLTDLFDLNVANNNLEGPIPDNISSCKNLNSLNVQGNKLNGTIPPTFQSLESMTYLNLSSNKLRGPIPIELSRIGNLDTLDISNNNISGSIPSSLGDLEHLLKLNLSRNHLTGFIPAEFGNLRSVMDIDLSNNQLSGLIPEELSQLQNMQSLRLENNNLSGDVTSLINCLSLSLLNVSYNNLVGVIPTSNNFSRFSPDSFIGNSGLCGYWMTSPCHRSHPTERVTLSKAAILGIALGALVILLMILLAACRPYNPSPFPDGSLDKPVTYSPPKLVILHMNMALHVYEDIMRMTENLSEKYIIGGGASSKVYKCVLKNCKPVAIKKLHSHYPQSLKEFETELETVGSIKHRNLVSLQGYSLSPYGILLFYDYMENGSLWDLLHGASKKKKLDWDLRLKIALGAAQGLAYLHHDCCPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDNESNLHHLILSKTANNAVMETVDPDITASCKDMGAVKKVFQLALLCTKRQPVDRPTMHEVMRVLGSLVPPTSPPKQVAPPPAASALLPSAKVPSCYMDEYANLKTPHLVNCPSMSTSDAQLFLKFGEVISQNSE 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0726 1078 Gene3D Transferase(Phosphotransferase) domain 1 818 1016 - -
Lele25g0726 1078 Gene3D Ribonuclease Inhibitor 280 352 IPR032675 -
Lele25g0726 1078 SUPERFAMILY L domain-like 354 641 - -
Lele25g0726 1078 Gene3D Ribonuclease Inhibitor 353 441 IPR032675 -
Lele25g0726 1078 Gene3D Ribonuclease Inhibitor 538 663 IPR032675 -
Lele25g0726 1078 ProSiteProfiles Leucine-rich repeat profile. 522 545 IPR001611 GO:0005515
Lele25g0726 1078 ProSitePatterns Serine/Threonine protein kinases active-site signature. 863 875 IPR008271 GO:0004672|GO:0006468
Lele25g0726 1078 SMART LRR_typ_2 257 281 IPR003591 -
Lele25g0726 1078 SMART LRR_typ_2 424 448 IPR003591 -
Lele25g0726 1078 SMART LRR_typ_2 376 400 IPR003591 -
Lele25g0726 1078 SMART LRR_typ_2 185 209 IPR003591 -
Lele25g0726 1078 SMART LRR_typ_2 544 567 IPR003591 -
Lele25g0726 1078 SMART LRR_typ_2 496 520 IPR003591 -
Lele25g0726 1078 SMART LRR_typ_2 568 591 IPR003591 -
Lele25g0726 1078 SMART LRR_typ_2 305 329 IPR003591 -
Lele25g0726 1078 SMART LRR_typ_2 592 615 IPR003591 -
Lele25g0726 1078 Pfam Leucine rich repeat N-terminal domain 118 158 IPR013210 -
Lele25g0726 1078 SUPERFAMILY Protein kinase-like (PK-like) 720 1008 IPR011009 -
Lele25g0726 1078 SMART serkin_6 742 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0726 1078 ProSitePatterns Protein kinases ATP-binding region signature. 748 771 IPR017441 GO:0005524
Lele25g0726 1078 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 818 1019 - -
Lele25g0726 1078 ProSiteProfiles Leucine-rich repeat profile. 211 234 IPR001611 GO:0005515
Lele25g0726 1078 SUPERFAMILY L domain-like 118 353 - -
Lele25g0726 1078 Pfam Leucine rich repeat 454 509 IPR001611 GO:0005515
Lele25g0726 1078 Pfam Leucine rich repeat 522 581 IPR001611 GO:0005515
Lele25g0726 1078 Pfam Leucine rich repeat 187 246 IPR001611 GO:0005515
Lele25g0726 1078 PANTHER LEUCINE RICH REPEAT KINASE 2 471 1012 - -
Lele25g0726 1078 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 713 817 - -
Lele25g0726 1078 Pfam Protein kinase domain 745 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0726 1078 ProSiteProfiles Leucine-rich repeat profile. 259 281 IPR001611 GO:0005515
Lele25g0726 1078 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 392 664 - -
Lele25g0726 1078 ProSiteProfiles Protein kinase domain profile. 742 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0726 1078 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 117 281 - -
Lele25g0726 1078 Gene3D Phosphorylase Kinase; domain 1 716 817 - -
Lele25g0726 1078 CDD STKc_IRAK 748 1011 - -
Lele25g0726 1078 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 282 391 - -
Lele25g0726 1078 Gene3D Ribonuclease Inhibitor 442 537 IPR032675 -
Lele25g0726 1078 Gene3D Ribonuclease Inhibitor 117 279 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0726 Lele-ChrLele25 4574874 4586741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0726 353 633 Receptor kinase-like Gene Family AT5G07180 37.908 1.70e-42 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Lele25g0726 Pkinase 4.2e-45 CL0016