Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0722 ATGACTAAGAAGATTACATGGAAGTCTATCATCTTCACGCTAAACTGTTACAGGACTGATTATCCCACGTTGCAGGAAAAACAACCTTTGAAAGGACAAGGTTCATTCCAGAGGTTGTGCCTCTCTGATGTAAGCAATTCTAGCTCATCTCAGGCCATTGACGATCTCTCAATTTCTCTGGCTGGTTCAAAACTTCATATATTCAGCCTAGAAGAGCTCCAGGAGGCAACCCATAATTTCTCATGGAGCAATCTGCTTGGTGAAGGGGGGTTTGGACCCGTCCATAAGGGTTTTTTTGATGAAAAACTTAGGACTGGATTGAAAGCTCAGCCTGTAGCTGTCAAACGCCTCGACTTAGGTGGCTTGCAAGGTCATAGGGAATGGCTGGCAGAGATTATCTTCCTTGGACAGCTGCAACATCCACATCTTGTTAAGTTGATTGGGTACTGTTATGAGGATGAGCATAGGCTTTTGGTTTATGAATACATGCCAAGAGGAAGCTTGGAGAACCAGCTCTTCAGAAGATACTCTGCTGTCTTGCCATGGTCAACCAGGATGAAAATTGCGCTAGGTGCAGCTAAGGGCCTGGCGTTCCTTCATGAAGTAGATAAACCAGTGATTTACAGAGATTTCAAAGCTTCAAACATTTTGCTGGACTCCGATTTCACAGCCAAACTTTCAGATTTCGGGTTGGCAAAGGATGGTCCAGAAGGAGAAGAAACACATGTAACAACACGGGTAATGGGGACACAGGGCTATGCTGCGCCAGAGTATGTAATGACAGGTCACCTCACAACAAAGAGCGATGTGTATAGCTACGGTGTGGTTCTGTTAGAATTGCTCGCAGGGAAGCGGGTGGTGGATAAGACCCGACCCAGTAAAGAGCATAGCTTGGTGGAGTGGGCGAGGCCTATGTTAAGGGACCCCAAAAAGCTGTATCGGGTCATAGATTCCAGATTGGAAGGTCAATTTCCTGCGAGAGGAGCTCGAAAGGTGGCTGCTTTGGCTTACAAATGCTTGAGTCACCACCCGAATCCAAGGCCCACCATGTCCGATGTGGTTGCCATATTGGAGACACTTCAGGGGTTTGACGATGTTTTCATAGGACCATTTGTGTATGTTGCCGTAAGTGAAGGTCAAAAAGAAGCGTAA 1152 0.4635 MTKKITWKSIIFTLNCYRTDYPTLQEKQPLKGQGSFQRLCLSDVSNSSSSQAIDDLSISLAGSKLHIFSLEELQEATHNFSWSNLLGEGGFGPVHKGFFDEKLRTGLKAQPVAVKRLDLGGLQGHREWLAEIIFLGQLQHPHLVKLIGYCYEDEHRLLVYEYMPRGSLENQLFRRYSAVLPWSTRMKIALGAAKGLAFLHEVDKPVIYRDFKASNILLDSDFTAKLSDFGLAKDGPEGEETHVTTRVMGTQGYAAPEYVMTGHLTTKSDVYSYGVVLLELLAGKRVVDKTRPSKEHSLVEWARPMLRDPKKLYRVIDSRLEGQFPARGARKVAALAYKCLSHHPNPRPTMSDVVAILETLQGFDDVFIGPFVYVAVSEGQKEA 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0722 383 SUPERFAMILY Protein kinase-like (PK-like) 56 358 IPR011009 -
Lele25g0722 383 FunFam Probable serine/threonine-protein kinase PBL8 163 370 - -
Lele25g0722 383 Gene3D Phosphorylase Kinase; domain 1 42 162 - -
Lele25g0722 383 CDD STKc_IRAK 86 360 - -
Lele25g0722 383 FunFam Serine/threonine-protein kinase BIK1 46 162 - -
Lele25g0722 383 PANTHER OS01G0588500 PROTEIN-RELATED 46 361 - -
Lele25g0722 383 Pfam Protein tyrosine and serine/threonine kinase 83 356 IPR001245 GO:0004672|GO:0006468
Lele25g0722 383 ProSiteProfiles Protein kinase domain profile. 80 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0722 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Lele25g0722 383 Gene3D Transferase(Phosphotransferase) domain 1 163 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0722 Lele-ChrLele25 4552215 4553772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0722 66 357 Glycoside Hydrolase AT3G07070 54.576 2.90e-106 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele25g0722 PK_Tyr_Ser-Thr 4.2e-48 CL0016