Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0718 ATGATGACGTCATCCAATTATTACGAATCACGGGGCAACGACCCCCGTCAATTTCACATCTCAAGTCCAAATCGATTTACCCGTTTAAGCCCTCCCATGGCTTCCCCAACACCTAATGATCCCGAACACACTCTCAGAACTACTGGCGACTCCCGCTCCACTAAATACAAAGGCGTCAGAAAGCGAAAATGGGGCAAATGGGTGTCTGAAATCAGGCTTCCCAACAGCCGAGAGCGCATTTGGCTGGGCTCCTATGACTCGCCAGAGAAGGCAGCCCGAGCCTTCGACGCCGCCCTCTACTGCCTGCGGGGTCGACATGCCAGTTTCAACTTCCCGGACACGCCTCTGGAGTTGGAGATCCCCGCCTCCGGCGATCATCGACACCAGTCTCGCTCCGCTCAAGAAATCCAAGAGCTTGCTGCTAGGTTTGCCAACGAGTACCAGCAGGACCTACCGATGGTTCAGCAATCTTCAGAAGCGGCTGCTCCTTCATCCTGCGAATCAGATGGCCTTACGGAGAGTGGTGATCCTGTAGAGGTGGACAACGATGTCGGGGACACAATGGACATTAACGACTGGTCGTTTTTGAAGTCACTGGATGAGATTGGCTCGGCCAATTACAGTAATTATAATTATAATGGTTTCTACTCTGGATTCGATAAGATGCACTCTGGGGAGTTATTGTTTCCCACATCACCACCTCATTTGCTCATCGATCATAATGTCAGTGACAATGGGGGCGCAATGGAATGCGACGACACTTTTTCCCAACAATCGTTGTTCCTTTGGAACTTTTGA 798 0.51 MMTSSNYYESRGNDPRQFHISSPNRFTRLSPPMASPTPNDPEHTLRTTGDSRSTKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDSPEKAARAFDAALYCLRGRHASFNFPDTPLELEIPASGDHRHQSRSAQEIQELAARFANEYQQDLPMVQQSSEAAAPSSCESDGLTESGDPVEVDNDVGDTMDINDWSFLKSLDEIGSANYSNYNYNGFYSGFDKMHSGELLFPTSPPHLLIDHNVSDNGGAMECDDTFSQQSLFLWNF 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0718 265 MobiDBLite consensus disorder prediction 154 171 - -
Lele25g0718 265 MobiDBLite consensus disorder prediction 1 33 - -
Lele25g0718 265 MobiDBLite consensus disorder prediction 154 183 - -
Lele25g0718 265 SUPERFAMILY DNA-binding domain 55 113 IPR016177 GO:0003677
Lele25g0718 265 Pfam AP2 domain 54 104 IPR001471 GO:0003700|GO:0006355
Lele25g0718 265 MobiDBLite consensus disorder prediction 1 56 - -
Lele25g0718 265 FunFam Ethylene-responsive transcription factor 2 54 113 - -
Lele25g0718 265 ProSiteProfiles AP2/ERF domain profile. 55 112 IPR001471 GO:0003700|GO:0006355
Lele25g0718 265 SMART rav1_2 55 118 IPR001471 GO:0003700|GO:0006355
Lele25g0718 265 Gene3D AP2/ERF domain 54 113 IPR036955 GO:0003700|GO:0006355
Lele25g0718 265 CDD AP2 54 114 IPR001471 GO:0003700|GO:0006355
Lele25g0718 265 PRINTS Ethylene responsive element binding protein signature 56 67 IPR001471 GO:0003700|GO:0006355
Lele25g0718 265 PRINTS Ethylene responsive element binding protein signature 78 94 IPR001471 GO:0003700|GO:0006355
Lele25g0718 265 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 41 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0718 Lele-ChrLele25 4532576 4533621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0718 45 265 AP2-EREBP Transcription Factor Family AT1G19210 44.541 7.95e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele25g0718 AP2 1.5e-12 CL0081