Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0712 ATGTATTATGCCAGACGAACCTCTGAGCCTCTGAACGATTTGAAGGGATTCTTCAGATCTACGGGCAAAAGCTATTTGGACATTATCATCCAAAATTCTTCTTCTTTCTGGGACTTCCGTGGTGGTTGGCTTCTCTCATTGGAAGCACAAAAAATGCATATCAGCTCCGATTCTTTTGAGATTGATATTTTTGAAGAGTTAGGTCGCGTTAAGTCCCAAACTGTATCTTCTGAATTCTCAGTATATGGTGCTTCAAGTTTGCCACCTCTGTATTCAACAACTCCTGTTGAAATTTTGAAGACAATCAATTCGTCAAATATTGTTTCTTTTTCAATGGTTTGTGAGATGGAACATGACCTTATGGAGGACATGGACATAGAAGTCCTGCCTTCAATGTGGCCAGAAGATATTGGAACTGATGCAGGGAAACAGTTTAACATAGAGAAGCCTGGAATTGACCAAGACATGTTAGAGGAGGTAACAATAGTGGAGGAGCCAACCATAGTAGATTTCAAGCGTCTCATGGAGCTCACCAATCAAACAGACAGAGGCTCGTCTCAGTTGACATATTTCATGAAATACTTGGAGTACAGGCAGGCTAATGCGGTGCGTCTCCTACGAGAAGAACTCGACAACCTAAGCAAACAGAGACAGGAGGTTGAGCTGAGGAAGTTAGAGATATTGGAAGAGCATCGGTTTGTGGATATAAGATATGGGGAGGACAAACGACCAGTTTCTATATTGGATAAAATTTATGACATATGGCAAGATATACCTCGTAAGAAAAATGTTGTTGTTGTTCAGAACAAGGGTATTGAAATAGATGTTGAGGATGATACTGTAGTGTACTGGAAGCAGAGGGCACTGCATTTGGAAAAATTGTTGGAGGCGAGTATTCAGAGAGAGCAGACACTTATGGAGAAGCTGGAAGAAAGCATAAAGAAGCTTGAAAAGCAGTCCTGTCCTGTAGAAGAATTGTCCCAGATTCTTAAAAGAGCAGATAATTTCTTGCATTTTATTCTGCAGAATGCACCTGTTGTCATAGGCCATCAGGACACAGAGTTGCGCTATCGCTTTATCTATAACCATTTCCCAAGTTTGCAAGAGGCGGACATCATAGGAAGAACAGATGTGGAAATTTTCACGGGGTCTGGAGTTAAGGAATCTCAAGATTTTAAGAGAGAAGTTCTGCAAAAAGGATTGCCTGCAAAAAGGGAAATTACTTTTGAGACAGAACTCTTTGGGTCAAAGACATTCTTAATTTATGTAGAACCTGTCTTTAGCAAGGCAGGGGAGACAATTGGGATAAATTACATGGGAATGGATGTAACAGATCAGGTGAGAAAAAGAGAGAGAATGGCCCAGATTAGGGAAGAGATTGCAGTTCAGAAAGCAAAGGAGACTGAATTAAACAAAACCATTCACATTACAGAGGAGACTATGCGAGCAAAACAAATGCTAGCAACCATGTCCCATGAAATAAGATCTCCACTGTCTGGGGTTGTTAGCATGGCTGAAATTCTTTCTACTACAAAGCTTGACAAGGAGCAAAGACAGCTCTTGGAAGTCATGCTTTCCTCAGGAGATTTGGTTCTTCAACTTATCAATGACATATTAGATCTTTCCAAGGTTGAGTCAGGAGCCATGAAGTTGGAAGCTACCAAATTCCGTCCAAGAGAGGTAGTAAAGCATGTGCTGCAGACTGCTGCAGCATCACTTCAGAAAATATTAACCCTACAAGGTCATGTGGCAGATGATGTCCCTATTGAGGTCATTGGAGATGTTTTAAGGATTCGGCAAATCCTCACAAATCTGATAAGCAATGCAATCAAGTTTACCCATGAAGGTAAAGTTGGCATAAATCTGTACGTTGTAGCAGAGCCCAACTTCGGAAAATCGAAAGAAGGTCTCCAAAAGATGAGTGGAGAAAAGTCAAATGTATCAGTGAGTGGATTGACAGAAGAGAAATACTTCTCAGCGTCTCAAAATGGGAGTGAAGAATGTAGATCTCCAGTTAAAAGCGAATGCTCAAGGAATGGGGATACAGAGGAACAACCTCATTCAACTGAAACTACAGTGTGGATACGTTGTGATGTATACGACACTGGCATTGGAATACCAGAAAAAGCAATTCCCACTTTATTTAAGAGGTATATGCAAGTCAGTGCAGACCACGCTCGAAAGTATGGTGGCACGGGGCTAGGATTAGCAATATGCAAACAACTGGTCGAATTAATGGGTGGTCGTCTAACGGTGTCAAGCAAAGAACACTGTGGTTCTACATTTACGTTCATACTCCCCTACAAGGTTTCTACCGCCTGTGATCATTCAGATGACCCTGACGAGATTTCAGATATGGAGAACGACGATGCTGCGACTGATGATGCCACGCAAGGATTCTTCCAATTCCAACCACGTACACTGGGCTCACTTTTCTCGTCCAACGGATCTGCCAGAGCCCCAAGGTTGTTACCCCATAGACGTGGGCTCACAATCCCACATAACTTTAATGGTTTTTCGCATACTTCTTACGAAATCTCTTCAAATGGAAGAACTTCAACAGAAGATGAAATCCGAGTGACAGTGACGGACTCGCCAGAGATGTCTGGATCAGGAAGTTCAATGACTCAAAAGCCAGAAACAGAGAACGAAAATGTAGTGAGCACAGACAAGCATCGTCAAGATAAAACATGCGCTCAACTCCCGAATGGTATTTCAAGTAGAGAAATTGGTGTGGCAACAAAGTCAAGCAGAACCCAGCAATCAAGTGAGACTCAAGAGAAGGATAACAGAACTTCCCAATCTGTTACCAGCAGAAGTAATAATAATACATCAGCAGTGGCCAAACCCCCATTAGAGCCTAAGATCCTTCTGGTTGAAGATAACAACGTCAACGTTATGGTGGCACGCTCGATGGTGAAGCAGTTAGGTCACAACATTGATGTGGTGAATAATGGAGTGGAAGCTGTGCTTGCAGTTCAGAGCCGGAGCTATGACCTCATTCTAATGGATATTTGCATGCCAGTTATGAATGGTATTGACGCAACAAAATTGATTCGCTCTTTTGAGGAAACTGGAAATTGGGATGCTGCAACAAAAGCTGGAATAGAGCCAAGCATTTCAACTTCAGATTTGCAGAAACCTGAATGTTGCCTGCCTTCCACAAAGCGAATGCCCATTATCGCGATGACGGCAAATGCCTTATTAGAGAGTGCGGAGGAGTGTTATGCAAATGGAATGGACTCATTTGTGTCTAAACCTGTGACTTTCCAGAAACTGAAGGAGTGCCTAGAACAATTCCTACGGTGA 3309 0.4234 MYYARRTSEPLNDLKGFFRSTGKSYLDIIIQNSSSFWDFRGGWLLSLEAQKMHISSDSFEIDIFEELGRVKSQTVSSEFSVYGASSLPPLYSTTPVEILKTINSSNIVSFSMVCEMEHDLMEDMDIEVLPSMWPEDIGTDAGKQFNIEKPGIDQDMLEEVTIVEEPTIVDFKRLMELTNQTDRGSSQLTYFMKYLEYRQANAVRLLREELDNLSKQRQEVELRKLEILEEHRFVDIRYGEDKRPVSILDKIYDIWQDIPRKKNVVVVQNKGIEIDVEDDTVVYWKQRALHLEKLLEASIQREQTLMEKLEESIKKLEKQSCPVEELSQILKRADNFLHFILQNAPVVIGHQDTELRYRFIYNHFPSLQEADIIGRTDVEIFTGSGVKESQDFKREVLQKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDVTDQVRKRERMAQIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDKEQRQLLEVMLSSGDLVLQLINDILDLSKVESGAMKLEATKFRPREVVKHVLQTAAASLQKILTLQGHVADDVPIEVIGDVLRIRQILTNLISNAIKFTHEGKVGINLYVVAEPNFGKSKEGLQKMSGEKSNVSVSGLTEEKYFSASQNGSEECRSPVKSECSRNGDTEEQPHSTETTVWIRCDVYDTGIGIPEKAIPTLFKRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHCGSTFTFILPYKVSTACDHSDDPDEISDMENDDAATDDATQGFFQFQPRTLGSLFSSNGSARAPRLLPHRRGLTIPHNFNGFSHTSYEISSNGRTSTEDEIRVTVTDSPEMSGSGSSMTQKPETENENVVSTDKHRQDKTCAQLPNGISSREIGVATKSSRTQQSSETQEKDNRTSQSVTSRSNNNTSAVAKPPLEPKILLVEDNNVNVMVARSMVKQLGHNIDVVNNGVEAVLAVQSRSYDLILMDICMPVMNGIDATKLIRSFEETGNWDAATKAGIEPSISTSDLQKPECCLPSTKRMPIIAMTANALLESAEECYANGMDSFVSKPVTFQKLKECLEQFLR 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0712 1102 SMART REC_2 954 1097 IPR001789 GO:0000160
Lele25g0712 1102 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 593 768 IPR003594 -
Lele25g0712 1102 Gene3D - 952 1102 - -
Lele25g0712 1102 MobiDBLite consensus disorder prediction 864 883 - -
Lele25g0712 1102 PRINTS Bacterial sensor protein C-terminal signature 754 767 IPR004358 GO:0016310|GO:0016772
Lele25g0712 1102 PRINTS Bacterial sensor protein C-terminal signature 730 748 IPR004358 GO:0016310|GO:0016772
Lele25g0712 1102 PRINTS Bacterial sensor protein C-terminal signature 695 709 IPR004358 GO:0016310|GO:0016772
Lele25g0712 1102 CDD HisKA 481 543 IPR003661 GO:0000155|GO:0007165
Lele25g0712 1102 Pfam His Kinase A (phospho-acceptor) domain 484 547 IPR003661 GO:0000155|GO:0007165
Lele25g0712 1102 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 123 1101 - -
Lele25g0712 1102 SUPERFAMILY CheY-like 954 1102 IPR011006 -
Lele25g0712 1102 Coils Coil 292 319 - -
Lele25g0712 1102 MobiDBLite consensus disorder prediction 835 856 - -
Lele25g0712 1102 FunFam Histidine kinase 5 948 1102 - -
Lele25g0712 1102 SMART HisKA_10 482 547 IPR003661 GO:0000155|GO:0007165
Lele25g0712 1102 Pfam Response regulator receiver domain 956 1024 IPR001789 GO:0000160
Lele25g0712 1102 MobiDBLite consensus disorder prediction 671 685 - -
Lele25g0712 1102 Gene3D - 470 547 - -
Lele25g0712 1102 FunFam Putative histidine kinase 5 470 547 - -
Lele25g0712 1102 Gene3D PAS domain 324 459 - -
Lele25g0712 1102 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 481 547 IPR036097 GO:0000155|GO:0007165
Lele25g0712 1102 CDD HATPase_EvgS-ArcB-TorS-like 598 767 - -
Lele25g0712 1102 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 536 770 IPR036890 -
Lele25g0712 1102 ProSiteProfiles Histidine kinase domain profile. 489 770 IPR005467 -
Lele25g0712 1102 CDD REC_hyHK_CKI1_RcsC-like 956 1097 - -
Lele25g0712 1102 SMART HKATPase_4 593 770 IPR003594 -
Lele25g0712 1102 ProSiteProfiles Response regulatory domain profile. 955 1101 IPR001789 GO:0000160
Lele25g0712 1102 MobiDBLite consensus disorder prediction 899 948 - -
Lele25g0712 1102 MobiDBLite consensus disorder prediction 660 687 - -
Lele25g0712 1102 MobiDBLite consensus disorder prediction 834 949 - -
Lele25g0712 1102 Coils Coil 203 230 - -
Lele25g0712 1102 Gene3D - 548 774 IPR036890 -
Lele25g0712 1102 FunFam Histidine kinase 5 324 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0712 Lele-ChrLele25 4485485 4491266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0712 112 1101 Histidine Kinase Gene Family AT5G10720 59.023 0.0 1130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele25g0712 HATPase_c 2.2e-27 CL0025