Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0710 ATGAAGAAGCTGATCGTCTTGTTTATGTGGGCTTTATGTTGTTCCCTGAGCAGCATGGCACAGAGAAACGAAAGCGTCCCAGTAAAAGTAGGAATCTTACTCGATCTTTCTTCTCCGGCCGCAAAGATGGGCTTGAGCTGCATCAACATGTCCCTCTCTGACTTTTACGCCTCTCGTTCTGATTACAGAACCAAGCTCGCCTTCACTGTCAGGGACTCCCACTCAGACGTTGTTTCCGCAGCTTCTCAAGCTCTAGATCTCATAAAATCAGAGAAAGTGGAAGCCATAATAGGTCCATTCACATCAATGGAGGCCATCTTTTTGATCAGTTTAGGAGACAAAGCTCGTGTTCCCATCATAACCTTTTCAGCAACAAGTCCTTCTCTGGCTTCCCTTCCAAGTTCATATTTTTTTCGTATCGCACAAACCGATTCAGCTCAGGTGAATGCCATTGGTGCAATCGTAGAAGCTTTTGGGTGGAAAGAAGCAGTGCCCATTTACGTAGAGAACGAGTACGGGAAAGGGGTCTTACCCTACTTGACTAATGCTCTTCAACAAGTATACGTTCGAATCCCATATCAGAGTTCTATTTCACCTTCAGCCACTGATGAAGATATCAGGGCAGAGCTCTACAAGTTGATGACCATGCAAACCAGAGTGTTTGTTGTTCACATGAACCCCAATCCAGGCGTGCGACTCTTCACCATTGCAAAACAGATTGGAATGATGAGCAACGGCTACGTTTGGATCGTAACAGATGGTTTGGCTAATGGATTAAGCTCTTTGAATTCCTCAGTCATAGAATCAATGGAAGGAGTGTTGGGTGTTAGGACTTCTATTCCTAAAACAGAGAAGTTAAATGACTTTAAAGTTCGATGGAAAAGAAGATTCCTACAAGAAAATCCTACCCTTGTTGATACTGATTTGAATGTTTTTGGAGTATGGGCTTACGATGGTGCCACAGCATTAGCTATGGCTATTGAGAAGGTTGATATCAACAATCTTGGGTTTGATATGAGCAATGCTTCGTCCAATTCCACTGATTTGGAAAAGATTGGAGTTTCAAAAAGTGGTGAAAAGCTCCGTGAAGCCTTATCAAACATTACATTTACAGGCCTAAGTGGAGAATTCAGCATTGTTAACAGGCAATTGCAAGCTTCGACGTTTGAGATATTGAATATGATTGGGAATGGAGGAAGAACCATCGGGTTTTGGACACCGCAAAACGGATTAGTCAGAAATCTTGACTCAACTAACGACACCGAAATGCATTATTCTGCATCAAGTAAGGATCTTGGTTCAATTATATGGCCAGGGGACACGAACTCCGTTCCAAAGGGATGGGAAATTCCAACTAATGGGAGGAAGTTAAGGATAGGTGTGCCTGTGAAAAATGGTTATCCTGAATTCGTGAAAGTATCCCATGACCCCATCACTAATACAACAGAGGTCACTGGATTTTGCATTGATGTGTTCAAAGCAGTTTTGGAAGTTCTCCCTTATGGCTTACCCTATGAATTCATCCCTTTTGCCAAACCAAATGGTGACAGTGCAGGATCGTACAATAATCTGATCAGCCAAGTTTATTTTGGGAACTTTGATGCTGTGGTGGGGGATGTAACAATTATAGCAAACAGGTCTAATTATGTGGATTTCACTTTGCCCTACACAGAATCTGGTGTAACAATGGTAGTTCCAGTGAAAGACAATAGGAAGAAGAATGCATGGGCCTTCTTAAAGCCATTGGCTTGGGATCTCTGGGTAACAATAGCTTGTTTCTTTGTATTCGTTGGGTTTGTTGTGTGGGTGCTTGAACACCGGATCAACGAACATTTCAGAGGGCCCCCATCGCACCAGATTGGAACATCCTTATGGTTTTCATTCTCGACCATGGTTTTTGCCCATCGAGAAAAAGTGGTGAGCAACCTGAGCAGATTTGTGGTGATCATATGGGTTTTTGTGGTTCTAATTCTGGTTCAAAGCTACACTGCTAGTCTGACAGCCCTTTTGACGGTTGAGCAGCTCAACCCAACTGTAACTGACGTTAATGTACTTATAAAGAAGAGAATGAACGTTGGTTACAAGAAAGGTTCGTTTGTGCGTGAAATCTTGAAGGAAATGGGCTTCCTCGATCGCCAATTCAAAACATATAAATCCACAGAGGAATGCAACGAACTCTTTGCAAGAGGAAGTGCAAACGGTGGCATTGCAGCCGCATTTGATGAAGTGCCATACGTCGTCAAAGTCTTTCTTCAAAGTTATTGTTCTAAGTATGCAATGGTTGAACCAACTTTCAAAACTGGCGGCTTTGGATTTGTGTTCCCTAAAGGTTCTCCTCTTGTGGCTGATATATCAAGGGCAATCCTGAATGTTACACAAGGAGATAAAATGAAGGTGATAGAGAATGCTTGGTTCAGAAAAAACAAGTGTCCAGATTCAGATACCTCAATTTCATCAAACAGTCTAGGACTTGAAAGCTTCTGGGGACTATTTCTCATTGTAGGGGTTGCTTCTGCTCTGGCTTTACTTGTCTTCGCAGTTAACTTCCTATATCAGCACAAGCAAATCTGGTTACAGAATGATCCCAATACCTCAAAGTGGAGACGAATTGGGAAGTTGGTAAAGAAGTTTGATCAGAAGGACCTGAATTCTCACACCTTCAGAAAAAGGGAAATGCAAAATAATAAGAGTGAAAATTATAGCAGACATGGTATTTGTGAAGTGGAGGCATCTCCACATACAAACTGCCCTCCAAGTCCATCTTCAGAATCTGAATCAGAATCAAGTTTCTCATTTTATAGTGAGGCTAGCCCAAATAGGCCTGAACCACTAGAAGACACAGAAATAACCTTAGTGCATGCTGTAATGTAG 2871 0.4225 MKKLIVLFMWALCCSLSSMAQRNESVPVKVGILLDLSSPAAKMGLSCINMSLSDFYASRSDYRTKLAFTVRDSHSDVVSAASQALDLIKSEKVEAIIGPFTSMEAIFLISLGDKARVPIITFSATSPSLASLPSSYFFRIAQTDSAQVNAIGAIVEAFGWKEAVPIYVENEYGKGVLPYLTNALQQVYVRIPYQSSISPSATDEDIRAELYKLMTMQTRVFVVHMNPNPGVRLFTIAKQIGMMSNGYVWIVTDGLANGLSSLNSSVIESMEGVLGVRTSIPKTEKLNDFKVRWKRRFLQENPTLVDTDLNVFGVWAYDGATALAMAIEKVDINNLGFDMSNASSNSTDLEKIGVSKSGEKLREALSNITFTGLSGEFSIVNRQLQASTFEILNMIGNGGRTIGFWTPQNGLVRNLDSTNDTEMHYSASSKDLGSIIWPGDTNSVPKGWEIPTNGRKLRIGVPVKNGYPEFVKVSHDPITNTTEVTGFCIDVFKAVLEVLPYGLPYEFIPFAKPNGDSAGSYNNLISQVYFGNFDAVVGDVTIIANRSNYVDFTLPYTESGVTMVVPVKDNRKKNAWAFLKPLAWDLWVTIACFFVFVGFVVWVLEHRINEHFRGPPSHQIGTSLWFSFSTMVFAHREKVVSNLSRFVVIIWVFVVLILVQSYTASLTALLTVEQLNPTVTDVNVLIKKRMNVGYKKGSFVREILKEMGFLDRQFKTYKSTEECNELFARGSANGGIAAAFDEVPYVVKVFLQSYCSKYAMVEPTFKTGGFGFVFPKGSPLVADISRAILNVTQGDKMKVIENAWFRKNKCPDSDTSISSNSLGLESFWGLFLIVGVASALALLVFAVNFLYQHKQIWLQNDPNTSKWRRIGKLVKKFDQKDLNSHTFRKREMQNNKSENYSRHGICEVEASPHTNCPPSPSSESESESSFSFYSEASPNRPEPLEDTEITLVHAVM 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0710 956 FunFam Glutamate receptor 575 705 - -
Lele25g0710 956 FunFam Glutamate receptor 456 575 - -
Lele25g0710 956 MobiDBLite consensus disorder prediction 914 936 - -
Lele25g0710 956 CDD PBP1_GABAb_receptor_plant 29 415 IPR044440 -
Lele25g0710 956 CDD GluR_Plant 455 805 - -
Lele25g0710 956 Gene3D - 149 309 - -
Lele25g0710 956 FunFam Glutamate receptor 2.7 712 812 - -
Lele25g0710 956 Gene3D - 342 456 - -
Lele25g0710 956 PIRSF IGluLR_plant 1 942 IPR017103 -
Lele25g0710 956 Gene3D - 62 148 - -
Lele25g0710 956 SUPERFAMILY Periplasmic binding protein-like I 27 439 IPR028082 -
Lele25g0710 956 Gene3D - 457 574 - -
Lele25g0710 956 Gene3D - 575 703 - -
Lele25g0710 956 MobiDBLite consensus disorder prediction 909 949 - -
Lele25g0710 956 Pfam Bacterial extracellular solute-binding proteins, family 3 481 806 IPR001638 -
Lele25g0710 956 SMART GluR_14 456 807 IPR001320 GO:0015276|GO:0016020
Lele25g0710 956 FunFam Glutamate receptor 318 455 - -
Lele25g0710 956 FunFam Glutamate receptor 149 307 - -
Lele25g0710 956 SUPERFAMILY Periplasmic binding protein-like II 434 808 - -
Lele25g0710 956 Pfam Ligand-gated ion channel 807 837 IPR001320 GO:0015276|GO:0016020
Lele25g0710 956 Gene3D - 752 812 - -
Lele25g0710 956 Pfam Receptor family ligand binding region 47 397 IPR001828 -
Lele25g0710 956 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 28 889 - -
Lele25g0710 956 SUPERFAMILY Voltage-gated potassium channels 583 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0710 Lele-ChrLele25 4467738 4471137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0710 6 954 Ion Channels AT2G29120 53.229 0.0 978