Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0697 ATGAGCTACATATGCAACTTGCATAAGATTCCAGATAAAAAAAATAGGCCCCCTACCGGGCAAATAGAAATGGGAATATATCTAAGCACTCCCAAAACTGAGAAGTTTTCCGAAGATGGTGAGAATGACCGTCTTAGATATGGTTTATCATCCATGCAAGGGTGGCGTGCAACAATGGAAGATGCTCATGCTGCATATCCAGATCTTGATGCGTCCACTTCATTTTTTGGTGTTTATGATGGGCATGGAGGTAAGGTTGTTGCAAAGTTTTGTGCCAAGTATCTTCACCAACAAGTTCTCAAAAGCGAAGCGTATACAGCTGGAGATATAGGAACCTCTCTTCAGAAAGCTTTTTTCAGAATGGATGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCTGTCTTAGGTGATAAGATAAACAAGTTTACTGGGATGATAGAAGGACTGATTTGGTCTCCTCGAAGCAGTGACGGTAATGACCAGGTTGATGATTGGGCTTTTGAGGAGGGACCGCATTCTGATTTTGCTGGGCCTACTTCAGGAAGCACTGCCTGTGTTGCAGTAATTAGAAACAACCAACTTCTTGTTGCAAATGCTGGGGATTCAAGATGCGTGATATCCAGGAAGGGTCAGGCGTACAATTTATCTAGGGACCACAAACCTGAACTTGAGATTGAGAAGCAAAGAATCTTAAAAGCTGGTGGTTTTATTCACGCAGGGCGAGTTAATGGCAGTTTAAATCTTGCAAGGGCTATAGGTGACATGGAATTTAAACAAAATAAATTTCTGCCTGCTGATAAGCAAATTGTGACTGCCAATCCCGATGTAAACACTGTGGAGCTTTGTGATGAAGATGAGTTTTTAGTGTTAGCATGTGATGGAATATGGGATTGTTTGTCAAGCCAGCAATTGGTAGATTATGTGCATGAACAACTGGTATCGGAAACGAAACTCTCAACCGTATGCGAGAGAGTACTTGATCGGTGTTTGGCACCATCAACTGTTGGAGGTGAGGGATGTGATAACATGACAATGATCTTGGTGCAATTCAAGAAACCCACCCGGTCTACTGAAGAAGCAGCAGAGCAATCCACTTCAAACGAACAAGCTGAACCTGAACCAAAACCAGAGGAAAGCGAAATCTAA 1152 0.428 MSYICNLHKIPDKKNRPPTGQIEMGIYLSTPKTEKFSEDGENDRLRYGLSSMQGWRATMEDAHAAYPDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLKSEAYTAGDIGTSLQKAFFRMDEMMRGQRGWRELAVLGDKINKFTGMIEGLIWSPRSSDGNDQVDDWAFEEGPHSDFAGPTSGSTACVAVIRNNQLLVANAGDSRCVISRKGQAYNLSRDHKPELEIEKQRILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPADKQIVTANPDVNTVELCDEDEFLVLACDGIWDCLSSQQLVDYVHEQLVSETKLSTVCERVLDRCLAPSTVGGEGCDNMTMILVQFKKPTRSTEEAAEQSTSNEQAEPEPKPEESEI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0697 383 SUPERFAMILY PP2C-like 26 354 IPR036457 -
Lele25g0697 383 Pfam Protein phosphatase 2C 46 126 IPR001932 -
Lele25g0697 383 Pfam Protein phosphatase 2C 176 336 IPR001932 -
Lele25g0697 383 PANTHER PROTEIN PHOSPHATASE 2C 34 351 IPR015655 GO:0004722|GO:0006470
Lele25g0697 383 SMART PP2C_SIG_2 51 352 IPR001932 -
Lele25g0697 383 MobiDBLite consensus disorder prediction 353 383 - -
Lele25g0697 383 Gene3D - 23 353 IPR036457 -
Lele25g0697 383 SMART PP2C_4 36 350 IPR001932 -
Lele25g0697 383 CDD PP2Cc 46 352 IPR001932 -
Lele25g0697 383 ProSitePatterns PPM-type phosphatase domain signature. 75 83 IPR000222 GO:0043169
Lele25g0697 383 ProSiteProfiles PPM-type phosphatase domain profile. 46 352 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0697 Lele-ChrLele25 4389710 4399211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0697 24 361 PP2C-type Phosphatase Gene Family AT2G25070 78.994 0.0 590