Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0692 ATGGCTCGTTCTTCAAGAGCTGCCTCGATTTCCCTTTACCTCGTATTCGTTCTCTTCGGCTTCTCTGCGGCCAAGGAAGTCTTGGTCGGAGGCAAGACCGATGCATGGAAGATACCGTCCTCTGAATCAGACTCCCTCAACAAATGGGCCGAACGATCACGTTTCCAAGTCGGGGACTATCTCGTCTGGAAATATGATGCAGGAAAAGACTCGGTCTTGCAAGTAAGCAGGGAAGACTATGGTGACTGCAGCACCGCCAATCCCATCAAAGTGTACAATGATGGAAACACCAAGGTGAAGCTCGACCGTCCTGGGCCATTCTACTTCATTAGTGGGGCTAAGGGACACTGTGAGGAAGGCCAGAAGCTCCTTGTGGTGGTTATCACTCCAAAGCGCAGGTTCACCGGTATTTCTCCGGCACCTGCTCCGGCTCCGATGGAGTTTGAAGGCCCAGCTGTGGCTCCCACTAGCACTGCCTCAGCTTTAAAAGGTGGCCTTGCAGCAGTTCTGGGATTACTGGCCATTTGGGCTTTCTGA 537 0.527 MARSSRAASISLYLVFVLFGFSAAKEVLVGGKTDAWKIPSSESDSLNKWAERSRFQVGDYLVWKYDAGKDSVLQVSREDYGDCSTANPIKVYNDGNTKVKLDRPGPFYFISGAKGHCEEGQKLLVVVITPKRRFTGISPAPAPAPMEFEGPAVAPTSTASALKGGLAAVLGLLAIWAF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0692 178 PANTHER BLUE COPPER PROTEIN 26 141 IPR039391 GO:0009055
Lele25g0692 178 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Lele25g0692 178 FunFam Early nodulin-like protein 1 24 132 - -
Lele25g0692 178 Gene3D - 23 131 IPR008972 -
Lele25g0692 178 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Lele25g0692 178 CDD OsENODL1_like 25 128 IPR041846 -
Lele25g0692 178 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0692 Lele-ChrLele25 4368783 4369414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0692 1 178 Phytocyanin Superfamily AT4G31840 55.307 1.32e-66 199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0695 01 4080896 4088243 Lele25g0692 25 4368783 4369414 CCT
Lele02g0681 02 4091531 4100425 Lele25g0692 25 4368783 4369414 CCT
Lele03g0692 03 4089708 4098711 Lele25g0692 25 4368783 4369414 CCT
Lele04g0697 04 4229096 4239390 Lele25g0692 25 4368783 4369414 CCT
Lele25g0692 25 4368783 4369414 Lele27g1400 27 20313998 20314628 hybridization
Lele25g0692 25 4368783 4369414 Lele28g0680 28 4357723 4359576 hybridization