Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0683 ATGCTTGTAGTCTTTGATTACTGCTTTAGCACGGATGTTTTGGATGAAGAAGAATATAAAGTTTATATATTGGGAATTATTGGGCTGCTTCATGATCACTTCCCCGAGTCTTCATTTATGGTGTTTAACTTTCGGGAGGGCGATCATCAAAGCCAGATAGCTAGCATTTTGTGTGACTATGACATGACTATAATGGAATATCCTCGACAGTATGAAGGTTGTCCGATACTCACTATGGAGACGATCCACCACTTCTTAAGATCAGGTGAAAGCTGGTTTCAACTTGGGCAAAATAATATTATCTTGATGCATTGCGAACGAGGTGGGTGGCCGGTTTTAGCATTCATGCTGGCTGCTCTCTTGATTTATAGGAAGCAGTATACAGGCGAGCAAAGAACCTTAGAGATGATATATAAACAAGCGCCTTGCGAACTTTTGCAGTTAATGTCCCCGTTGAATCCTTTACCTTCACAATTGCGGTATCTTCAGTATGTATCAAGAAGAAATGTAGGTGCACAATGGCCTCCTCTAGATAGAGCACTTACATTGGATTGTGTTATTATGAGATTAATTCCTAATATGGATGGAGAGGGAGGTTGCTGTCCTATATTTAGAATATATGGACAGGACCCTTTTATGGCTGCTGATCGGACTCCCAAAGTTCTTTTTTCTACTCCAAAAAGGAGCAAAGTCGTCCGGCATTACAACCAGGTGGATGACTGTGAACTTGTAAAGATTGACATCCATTGTCATGTTCAAGGCGATGTTGTTCTTGAGTGTATTAGTCTGGATAGTGATTTGGAACGTGAGGAAATGATGTTTCGTGTCATGTTTAATACAGCTTTCATCCGATCGAATATTTTGATACTTAACCGTGATGAAATTGACACCTTGTGGAATGGTAAAGACCAATTTCCGAAAGATTTTAGAGTAGAGATTCTTCTCTCAGATATGGATGCTGTTTCTTCTGTTATTTCAATTGATATGCCTCGGATTGAGGACAAAGAAGGCCTTCCTATTGAAGCATTTGCCAAGGTTCAAGAAATTTTCAGCAATGTTGATTGGTTAGACTCAAAAACAGAGGTAGTGAATGTGCTCCAGCAGATGACAGCATCAAATAAGCTCCAGGAAATATTGGACAGTGGAGTTTCTGCAACACCAAGCAACTTGCTAAAGGATTCATTGTCTGGAATATCTAAATTTGCTCTAATAACACTGCCAGAAAATGATAACAAGGTTACTCCAGCCTCAGGGAAGGGGAAGCAATTTATTTCCCCATTAGAACTCTCAACTGATTCAAATCTTACTAGAAAGATTATCTCATTGGGATCGAAGGCACCGCTGGAAAATGATACTGAGAATCTTACATTAATGGCTCAAGGGAATCAATCTCTTCCCTTAGAACTGCCCATAGATGAAACCTTGATGAAAGAGAAGATAGAAAATGATGCCGAATGTATTACTTCAATGGTACAAGAGAAGGAACCTATTCTTTTAACTGACCCATCCATGGAAGCAAAATCAATGGGAAAAAAGATCGAAACATTAGAATTAAAAGCATTGCCGGAAAATGATACAAAGAGTCTCACATCCACAGCTCTGGCCAAACAATCTATTCTCTCACACAAGCCTTCTGATGTTGCTAATTCTGTTAAAAAGAGGATAGAGACATCAGAAACAATGGCATTGTCCAAAGACAGTAACAAGAGTCTCACACCCACAGCTCAGATCAAAGAATCTATTCCCTCATATGAACCTTCTGTTGATCCTAATTCTCTCAAAAGGAGGATTGAATCTCAACATTTACAGGTTGCTCTTCAGTTGCCCACCCAATCCAAAATAATTTCTCCACGGGTGCGTCAAGCTTCTCAATCTGCTCCAGTTTTATATTGCAGTTCTTTACAAGGTTCACCTGTGCCTATATCAAGATATCCTAGTGCACCGTTAGCCCTCGGAATAACAGCTTTGTTGCAGGATCGTGCTGAAGGGGATATCAAGAAAGAAGCCAATCATGGAGTTACTATGGCCCCCTCTGTCTTAGAGGTGCCAAAATCTGTAGACATAAGTCCTACAAGTCTTCCTCCAGTGTCGTCTTCAAAATTGCGGCGATCTTTATCACTGAAATGTTTGATGGATGTTCCCGCAGTCACTCATAACACTGTTGCATCCCTTGGTCCTGCTGTTTCTTCTCCTTCTCCTCCTCAACCTCAGCCTACTTCAGAAATGATGCAACCTATTGTCGCCCAGCACCCAGAAAATATAGCACCTGATAAAACTAAAAAAGCATTGGTTTCTCCTACTCCTAAACCTAAACCTCGATCTCAGCCTACTTCAGAATTGACGCCACCTGCTTTCACCCCACACCCTGAGAATATACTGCATGACAAAGGTGAAAGGTCATTAGTTTCTCCTCATCAACCTCAGCTTTCTTCAGAATTGATGCAACCTATTGTCTACCAGCAGCCTGAAAATACAACGCATGATAAAAGTAAAAAGTCATTAGTTTCTCCTCCTGCACCTCCGCCTCTACCTCCTAACTCAACTGTAGCTCCTGTTCTGTCATCTTCGTCCACAAAGATTTCATTGCCAACCCTTCCTCCGCCCACTCCACCACCTCCCACTGTAAAAAGTTCATTTTCATCTCCCCTTCTCCATCCCTCACTTCCTTACCCAACAACTGTTCCTCTTCCTGCATCTTCTATGAATAGATCATTTTCACCCCCTCTTTCACCAACTCTAGCCCCTCCACATTCCACTCCAGAAAATTCACTCAAAGCTCCCCCTCCTCCACCGCCACCTCCACCTCCACCTCCACCTTCAACTTCTAAGACATTTTCAATACCTCTCCCTCCATTCTCTGGGATTCCTTCTTCAGCTGCCCATTTTAATCCTTCTCCACTGAATATGAACAATTCTGCTGCTACCTTTGGCCCTCCACTCCCACCTCCACCTCCTGGGTATTCTGGAACCATGTCTGGTCCTACTCTTACATCAACAATGCCGCCGCCGCCGCCCCCACCACCTGCATCTCCTACCACAACTTTGACAAAGAACTCTGCCACTGCTCCACCTGTACCTCCTCCTCCTTCTGCTAATGGGACTCTACACCCTGGCACTGGTAATGGACATGTACCTCCAGCACCTGGACCGCCTAGTTTTCCATTTGGTGCAAAGGGACGTGGCTTGTCACGACTAGATATAAAACAAACTAAAAGGAGTAATCTGAAACCTTACCATTGGTTAAAATTAACAAGGGTCATGCACGGAAGTTTATGGGCTGAGACACAGAAACCTGAGGAAGCTTCTAAGGCTCCAGAATTTGACATGTCAGAACTTGAGAGTCTTTTCTCTGCAGCTACTCCAAATTCTGATCGTGGAGGCAAAGGAGGACAATCCAATCGTCGTGGCTCAGGGACTAAAACTGAGAAAGTTCAACTGAGCTGTGTGCTTGCTTTGGATGATTCAGCATTAGATGTCGATCAGGTTGAGAACCTCATAAAGTTCTGTCCAACGAAGGAAGAGATGGAAATCCTCAGGAACTACACTGGAGATAAGGACAACTTAGGAAGGTGTGAACAGTTCTTCTTAGAATTGATGAAAGTTCCAAGAGTAGAAAGCAAGTTAAGAGTATTTTCTTTTAAGATACAATTCGGCACTCAGGTTTCTGAGCTTAGAAGGGACTTGAATATTGTAAACTCTGCATCTGAAGAGATCAGGAATTCAGTCAAGTTGAAAAGAATTATGCAGACCATTCTTTCTCTTGGTAATGCTTTGAACCACGGAACTGCAAGAGGCGCTGCTATTGGGTTTCGATTGGATAGTCTCCTTAAGCTCACCGATACACGAGCCAGGAACAACAAAATGACACTCATGCATTATCTTTGTAAGGTGCTTGCTGAAAAGCTGCCAGAACTTCTAGATTTCTCGAAAGACCTAGAGAGCTTGGAGGCTTCAACCAAGATACAATTGAAATATTTGGCAGAGGAAATGCAAGCTATTAGTAAAGGTCTTGAGAAAGTAGTTCAGGAATTGACTGTGTCAGAGAATGATGGGCCCGTGTCAGAGAATTTCTGCAAGATTTTAAAGGAATTTCTTAGTGATGCTGAAGCCGAAGTGAGGTCTTTGGCTCAACTTTATTCAAATGTGGGTAGAAACGCGGATGCATTAGCTCAATACTTTGGAGAGGATCCTGCACGTTGCCCATTTGAACAAGTTGTATCCACCCTACTCAACTTTGTGAAGATGTTTGAACGAGCCCATAAAGATAACTGCAAGCAGCTTGAATTCAAGAAAAAGAAAGCAATGAAGGAAGCAGAAAATGAGAAGTTGAAGTTAACTCCTAAAAAGGAGTCTGAACAAATGATACGAACCCCCATTGAGAGTGGCAAAATTAAGTGA 4398 0.4236 MLVVFDYCFSTDVLDEEEYKVYILGIIGLLHDHFPESSFMVFNFREGDHQSQIASILCDYDMTIMEYPRQYEGCPILTMETIHHFLRSGESWFQLGQNNIILMHCERGGWPVLAFMLAALLIYRKQYTGEQRTLEMIYKQAPCELLQLMSPLNPLPSQLRYLQYVSRRNVGAQWPPLDRALTLDCVIMRLIPNMDGEGGCCPIFRIYGQDPFMAADRTPKVLFSTPKRSKVVRHYNQVDDCELVKIDIHCHVQGDVVLECISLDSDLEREEMMFRVMFNTAFIRSNILILNRDEIDTLWNGKDQFPKDFRVEILLSDMDAVSSVISIDMPRIEDKEGLPIEAFAKVQEIFSNVDWLDSKTEVVNVLQQMTASNKLQEILDSGVSATPSNLLKDSLSGISKFALITLPENDNKVTPASGKGKQFISPLELSTDSNLTRKIISLGSKAPLENDTENLTLMAQGNQSLPLELPIDETLMKEKIENDAECITSMVQEKEPILLTDPSMEAKSMGKKIETLELKALPENDTKSLTSTALAKQSILSHKPSDVANSVKKRIETSETMALSKDSNKSLTPTAQIKESIPSYEPSVDPNSLKRRIESQHLQVALQLPTQSKIISPRVRQASQSAPVLYCSSLQGSPVPISRYPSAPLALGITALLQDRAEGDIKKEANHGVTMAPSVLEVPKSVDISPTSLPPVSSSKLRRSLSLKCLMDVPAVTHNTVASLGPAVSSPSPPQPQPTSEMMQPIVAQHPENIAPDKTKKALVSPTPKPKPRSQPTSELTPPAFTPHPENILHDKGERSLVSPHQPQLSSELMQPIVYQQPENTTHDKSKKSLVSPPAPPPLPPNSTVAPVLSSSSTKISLPTLPPPTPPPPTVKSSFSSPLLHPSLPYPTTVPLPASSMNRSFSPPLSPTLAPPHSTPENSLKAPPPPPPPPPPPPPSTSKTFSIPLPPFSGIPSSAAHFNPSPLNMNNSAATFGPPLPPPPPGYSGTMSGPTLTSTMPPPPPPPPASPTTTLTKNSATAPPVPPPPSANGTLHPGTGNGHVPPAPGPPSFPFGAKGRGLSRLDIKQTKRSNLKPYHWLKLTRVMHGSLWAETQKPEEASKAPEFDMSELESLFSAATPNSDRGGKGGQSNRRGSGTKTEKVQLSCVLALDDSALDVDQVENLIKFCPTKEEMEILRNYTGDKDNLGRCEQFFLELMKVPRVESKLRVFSFKIQFGTQVSELRRDLNIVNSASEEIRNSVKLKRIMQTILSLGNALNHGTARGAAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFSKDLESLEASTKIQLKYLAEEMQAISKGLEKVVQELTVSENDGPVSENFCKILKEFLSDAEAEVRSLAQLYSNVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFERAHKDNCKQLEFKKKKAMKEAENEKLKLTPKKESEQMIRTPIESGKIK 1465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0683 1465 Gene3D Protein tyrosine phosphatase superfamily 1 170 IPR029021 -
Lele25g0683 1465 MobiDBLite consensus disorder prediction 1118 1139 - -
Lele25g0683 1465 MobiDBLite consensus disorder prediction 958 975 - -
Lele25g0683 1465 SMART it6_source 1063 1463 IPR015425 -
Lele25g0683 1465 PANTHER FORMIN-J 4 1452 - -
Lele25g0683 1465 MobiDBLite consensus disorder prediction 823 1070 - -
Lele25g0683 1465 Pfam C2 domain of PTEN tumour-suppressor protein 179 316 IPR014020 -
Lele25g0683 1465 Coils Coil 1424 1444 - -
Lele25g0683 1465 MobiDBLite consensus disorder prediction 752 794 - -
Lele25g0683 1465 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1078 1434 - -
Lele25g0683 1465 MobiDBLite consensus disorder prediction 863 877 - -
Lele25g0683 1465 SMART PTEN_C2_2 176 317 IPR014020 -
Lele25g0683 1465 PRINTS Proline rich extensin signature 760 772 - -
Lele25g0683 1465 PRINTS Proline rich extensin signature 866 882 - -
Lele25g0683 1465 PRINTS Proline rich extensin signature 911 936 - -
Lele25g0683 1465 PRINTS Proline rich extensin signature 833 854 - -
Lele25g0683 1465 PRINTS Proline rich extensin signature 775 791 - -
Lele25g0683 1465 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1065 1442 IPR015425 -
Lele25g0683 1465 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 180 318 IPR035892 -
Lele25g0683 1465 ProSiteProfiles C2 tensin-type domain profile. 178 318 IPR014020 -
Lele25g0683 1465 MobiDBLite consensus disorder prediction 1438 1456 - -
Lele25g0683 1465 Pfam Formin Homology 2 Domain 1148 1417 IPR015425 -
Lele25g0683 1465 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 41 166 IPR029021 -
Lele25g0683 1465 MobiDBLite consensus disorder prediction 561 591 - -
Lele25g0683 1465 MobiDBLite consensus disorder prediction 909 945 - -
Lele25g0683 1465 MobiDBLite consensus disorder prediction 1438 1465 - -
Lele25g0683 1465 Gene3D - 175 321 - -
Lele25g0683 1465 MobiDBLite consensus disorder prediction 561 587 - -
Lele25g0683 1465 MobiDBLite consensus disorder prediction 997 1012 - -
Lele25g0683 1465 MobiDBLite consensus disorder prediction 894 908 - -
Lele25g0683 1465 Gene3D Formin, FH2 domain 1084 1456 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0683 Lele-ChrLele25 4318386 4326138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0683 510 668 FH2 protein (formin) Gene Family AT2G25050 31.658 4.38e-11 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0683 25 4318386 4326138 Lele27g1407 27 20357325 20364950 hybridization
Lele25g0683 25 4318386 4326138 Lele28g0672 28 4312294 4320021 hybridization