Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0682 ATGCTTCAAGTTCTGAACAGCAAATACCAAAAGGTTCAGTCTCAACTTGAAGAAATAAGAGGATTGGACTACTCGAATCAAATTGCATCAGCTTCCTCTGATTACGATACGATGAACAATAAGAGACAAACAATTGAGTTACCCATAGCTCATAAGCCACTGCAGATCCTTGCCAGAACCCATCCCAAGGATAACAGTACGGTGCAAAGATGTGTCCAAGACAGGTCAATCCTAGTGGCAACTTATGAAGGAGAACACAATCATGGGGTTGTTGATCCTCAAACTCCCGAAGGCACAATTTCTGACGACAAAGAAGTCACCAATGTTAATGATGTCAGGCTTCTGACAGATAGAAGACACGCTGAGGATCTGAGCAACATCAGAATCGAACAATTTGTAGGTTCTCTCATCAAAGATCCCGACTTCACCGTATCGTTAGCCGAAGCAGTTGCACGCTCCATCACTACCCAACAACGTAAGCAACAAGACCTTGACCTTAATTTGAGCCTTGCCGAAGTGTAA 522 0.4349 MLQVLNSKYQKVQSQLEEIRGLDYSNQIASASSDYDTMNNKRQTIELPIAHKPLQILARTHPKDNSTVQRCVQDRSILVATYEGEHNHGVVDPQTPEGTISDDKEVTNVNDVRLLTDRRHAEDLSNIRIEQFVGSLIKDPDFTVSLAEAVARSITTQQRKQQDLDLNLSLAEV 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0682 173 Coils Coil 2 22 - -
Lele25g0682 173 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 68 90 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0682 Lele-ChrLele25 4316513 4317644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0682 68 159 WRKY Transcription Factor Family AT2G25000 32.258 2.15e-09 53.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0682 25 4316513 4317644 Lele01g0681 01 4007951 4010680 CCT
Lele25g0682 25 4316513 4317644 Lele02g0669 02 4022882 4025389 CCT
Lele25g0682 25 4316513 4317644 Lele03g0676 03 4005715 4013557 CCT
Lele25g0682 25 4316513 4317644 Lele04g0683 04 4160702 4162016 CCT
Lele25g0682 25 4316513 4317644 Lele27g1409 27 20371672 20373155 hybridization
Lele25g0682 25 4316513 4317644 Lele28g0671 28 4310155 4311339 hybridization