Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0681 ATGATGGAAGAGTTGAATCGTTTAAGTAGTGAGAAAAAGATGCTAACTGAGAAGCTTAGTCGCGTGACTGAGAGCTACAGAGCTCTGAAAAAGCAATTGAACAAAGTGCTTCAGAACACCAATTCTCAGTTGGACTTAAGCACAGTGGTACAATCAAGGAAGAGAAAGGCTGAAACCGATCAGAATTGTATCACTAATAATAATAAGTTTAATTTTAGCGGCGCTTCTAAGTGCAGCACCAGCACTGAGGATTATTCATTCAAGAGGCCCAAGGACCAGAGTCTCATGAGTCTCAGTCACCCTATTTCTCCCAAGGTTTCAAAGGTTTTTTATGTGAGAGATGGGTATCAGTGGAGGAAATATGGTCAGAAGGTGACTAGAGATAACCCTTTTCCTAGGGCTTACTTTAGGTGCTCTTTTGCCCCTAACTGCCCTGTGAAAAAGAAGGTGCAAAGAAGCGCGGAAGACCCAACATTATTGGTGGCGACTTACGAAGGAGAGCACAACCATAGTGTGCAGGGAGCTCAAAGTGAATCGTTGAATGTGAATGCTGAGCAGAAATCATTCCATCACTATCTGGCTCAACAGATAGCTTATTCTTTGTCAAGAGATCCCATTTTCACATCAGCTCTTGCTTCTGCCCTTTCTGGATTTAGACCACAGCACTGTTCCCTAGCTAATTCATTTACATTTATGTAA 699 0.4235 MMEELNRLSSEKKMLTEKLSRVTESYRALKKQLNKVLQNTNSQLDLSTVVQSRKRKAETDQNCITNNNKFNFSGASKCSTSTEDYSFKRPKDQSLMSLSHPISPKVSKVFYVRDGYQWRKYGQKVTRDNPFPRAYFRCSFAPNCPVKKKVQRSAEDPTLLVATYEGEHNHSVQGAQSESLNVNAEQKSFHHYLAQQIAYSLSRDPIFTSALASALSGFRPQHCSLANSFTFM 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0681 232 ProSiteProfiles WRKY domain profile. 107 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele25g0681 232 Coils Coil 5 39 - -
Lele25g0681 232 SUPERFAMILY WRKY DNA-binding domain 107 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele25g0681 232 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 175 IPR044810 GO:0003700
Lele25g0681 232 SMART WRKY_cls 112 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele25g0681 232 Pfam WRKY DNA -binding domain 114 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele25g0681 232 Gene3D WRKY domain 102 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0681 Lele-ChrLele25 4309034 4310334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0681 1 222 WRKY Transcription Factor Family AT2G25000 43.277 4.10e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele25g0681 WRKY 7.7e-25 CL0274