Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0680 ATGGAGGAGAGTGATACTCTGTTTGGGCGGTACGAAATCGGGAGGCTTCTGGGGAAAGGGACGTTCGCTAAAGTCTATCACGGCAAGCAAATACTAACCGGCGAGAGCGTTGCAATCAAAGTGATAAGCAAAGAGAAAGTGAAGAGACAAGGGATGATGGAGCAGATCAAGCAAGAGATCTACATCATGCGTTTGGTTCGACACCCCAACGTTGTTGAACTCAAAGAAGTAATGGCCACCAAAACTAAGATCTTCTTCGTCATGGAGCATGTTCGTGGAGGCGAGCTCTTCCACAAGTTCGCTAGAGGCAAACTCAAAGAGGATCAAGCACGAAAGTACTTCCAACAGTTAATCAGAGCCGTTGATTTCTGTCACAGCAGAGGCGTCTCTCACAGAGATCTCAAGCCAGAGAATTTGTTACTTGATGACAACGGGAATCTTAAAGTCACCGATTTTGGCCTCTCGGCGTTGCCGGAGCACATCCAATGCGACGGCCGCCTCCACACCCAGTGTGGAACTCCGGCGTATGTTGCCCCTGAAGTTTTGAGAAAGAAAGGGTACGACGGATCCAAAGCTGATATTTGGTCCTGCGGGGTGATTCTTTACACATTATTGGCTGGATTTCTTCCGTTTCAACATGAAAACATCATGACTATGTACACTAAGATTTTCAAAGCCGAGTTTCAATTTCCTCCGTGGTTTTCTGCGGAATCAAGGAGGCTGATTTCGAAGATTCTCGTGCCAAACCCAGAAAGACGAATCACGATTCCTGCGATAATGCGGGTCCCGTGGTTTCAAAAGGGGTTTTCGATCGCATCGGCGTTTCATTCAGAAGAGGCCACTTCGGATAAAGCCGTTGAAGAAGATTCCAGAACCAAGCTTTCATCATCCCCTAAGTTTTTCAATGCGTTCGAGTTTATTTCTTCGATGGCTTCTGGGTTTGATTTGTCTCGATTGTTCGAGGACAAGAGGAAGACCGGTTCAACGTTCACTTCCAAGTTTTCGGCTACGACGATTATGTTGAAGATTGAGACGATGGCGAAGAGGTTAAGCTTCAAGACAGCAAAGGTGAAGGACTTCAAAATCAAGATGGAAGGGCGGTCGGAGGGGAGGAAAGGGAGGTTGCACGTGACGGCGGAGGTGTTTGAGGTGGCGCCGGAAGTCAACGTCGTGGAGTTCTCAAAGTGTTCCGGCGACACTTTGGAATATGCCAAGTTTTGCGAGGAAGATGTGAGGCCAGCTCTGGAAGACATTGTTTGGACGTGGCAAGGTGACAGCACGTGTAGCGGTGACGTCGGAAATGGCGCGGGAGAACAAACGATGAAACAAGTAACATAA 1338 0.4813 MEESDTLFGRYEIGRLLGKGTFAKVYHGKQILTGESVAIKVISKEKVKRQGMMEQIKQEIYIMRLVRHPNVVELKEVMATKTKIFFVMEHVRGGELFHKFARGKLKEDQARKYFQQLIRAVDFCHSRGVSHRDLKPENLLLDDNGNLKVTDFGLSALPEHIQCDGRLHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGVILYTLLAGFLPFQHENIMTMYTKIFKAEFQFPPWFSAESRRLISKILVPNPERRITIPAIMRVPWFQKGFSIASAFHSEEATSDKAVEEDSRTKLSSSPKFFNAFEFISSMASGFDLSRLFEDKRKTGSTFTSKFSATTIMLKIETMAKRLSFKTAKVKDFKIKMEGRSEGRKGRLHVTAEVFEVAPEVNVVEFSKCSGDTLEYAKFCEEDVRPALEDIVWTWQGDSTCSGDVGNGAGEQTMKQVT 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0680 445 ProSiteProfiles NAF domain profile. 296 321 IPR018451 GO:0007165
Lele25g0680 445 SMART serkin_6 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0680 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Lele25g0680 445 ProSiteProfiles Protein kinase domain profile. 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0680 445 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Lele25g0680 445 SUPERFAMILY Protein kinase-like (PK-like) 7 287 IPR011009 -
Lele25g0680 445 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Lele25g0680 445 CDD CIPK_C 302 415 - -
Lele25g0680 445 Gene3D Kinase associated domain 1, KA1 295 421 - -
Lele25g0680 445 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Lele25g0680 445 FunFam Non-specific serine/threonine protein kinase 4 299 - -
Lele25g0680 445 Pfam Protein kinase domain 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0680 445 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 415 - -
Lele25g0680 445 CDD STKc_SnRK3 10 264 - -
Lele25g0680 445 Pfam NAF domain 298 356 IPR004041 GO:0007165
Lele25g0680 445 FunFam Non-specific serine/threonine protein kinase 296 420 - -
Lele25g0680 445 Gene3D Transferase(Phosphotransferase) domain 1 91 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0680 Lele-ChrLele25 4299099 4300436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0680 2 427 CBL-interacting serine-threonine protein kinases AT5G10930 69.266 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele25g0680 Pkinase 2.2e-74 CL0016