Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0674 ATGGCAAAGTATGACCGGAACAACGTCGGATCTCTGGTTCTCGACTATCACGATCCTACCAGGAATGCAACAGTCGGCGCCCACTGCCGCATATGGAATGCCTTGTCCGCTTCAACAGTACGCCGCATCATTTTTGACACTGTCAGCTGCGGTGGCTCTCGGCATCACCGCCATCACCGCCATCACCGTAATGACTTTGCCTCAACACCCTCGCCGATTTCATCAGACTCCGGGAACTCTAAGGACAAGTCGCAAGAACAGAGACAGGGTGCTTCCAAGTCTCAGCCGAAACCAAATGCCAAGTCGGAGAAACTATCGGATCTTCTGAATATAGCAGAGTCTGAAATTGACACCCAAACGAAGAAAAAAGAAGAGTCATTGCAGGAGCTGAAGAAAATTGTGAAGGAGTTACAGGTTGAGGATTTGACAAAGCGGCAAATGGCTGCGGCTAGCGTGAGATTGCTCGCAAAGGAAGACTTGGAAGTCAGAGGGACACTTGCAATGCTTGGAGCCATCCCTCCCCTGGTTGTAATGCTTGATTTGGAAGACGTCAATTCTCAGATCTCTTCTCTCTATGCGTTACTCAATCTTGGAATCGGCAACGACGCAAATAAGGCAGCCATTGTCAAAGTTGGTGCTGTTCACAAAATGCTAAAGCTCACTGGATCACCAAGTTGTTCAGATTCATCCGTCTCTGAAGCAGTTGTTGCAAATTTCCTTGGCTTGAGTGCTTTGGATACGAATAAACCAATAATTGGATCGTCGGGTGCGATTCCTTTCCTGTTTAGAACCCTGGAAAATTTACATGAAGGAACTAGCCCCCAGGCTAAGCAAGATGCTCTCCGAGCACTATACAATCTATCAATCTTCCCAGCTAACATCTCATTTATATTGGAAACGGATTTGGTTCCGTTTCTGATAAACGCAATAGGAGACATGGAAGTAAGTGAAAGAATTCTCTCAATCCTAAGCAATTTGGTATCAACCCCTGAGGCTCGAAAATCTATAAGTGCTGTGCGCGATGCATTCCCCATTCTGGTGGATGTATTGAATTGGACAGATTCACCTGGATGCCAGGAAAAAGCATCTTATATTCTGATGATTATGGCACACAAAGCCTATGGTGACAGGCAGGCCATGATCGAGGCTGGGATTGCCTCGTCATTGCTTGAGTTGATGCTTCTGGGCACTGCGTTGGCACAGAAAAGGGCCTCGAGAATATTGGAATGCTTAAGATTAGACAAAGGGAAGCAGGTATCCGGGATTTCTGTCGGAAACTCCAGTTCAACTGTATCTGCTCCCATTTGTGGCTCTTCATCATCTTGTGCGAAGCCAGATGGAAGTGGAGACGAGTGTTTGGAAGAGGAGGAAGATATGATGAGTGACGAGAAGAAGGCAGTGAAGCAATTAGTCCAGCAGAGTTTGCAAAACAACATGAGGAAAATTGTGAAAAGGGCAAATTTGCCTCAAGATTTCGTTCCATCCGACCATTTTAAGGCACTCACTTCAGGATCGACTTCAAAAAGCCTTCCATTTTGA 1539 0.4626 MAKYDRNNVGSLVLDYHDPTRNATVGAHCRIWNALSASTVRRIIFDTVSCGGSRHHRHHRHHRNDFASTPSPISSDSGNSKDKSQEQRQGASKSQPKPNAKSEKLSDLLNIAESEIDTQTKKKEESLQELKKIVKELQVEDLTKRQMAAASVRLLAKEDLEVRGTLAMLGAIPPLVVMLDLEDVNSQISSLYALLNLGIGNDANKAAIVKVGAVHKMLKLTGSPSCSDSSVSEAVVANFLGLSALDTNKPIIGSSGAIPFLFRTLENLHEGTSPQAKQDALRALYNLSIFPANISFILETDLVPFLINAIGDMEVSERILSILSNLVSTPEARKSISAVRDAFPILVDVLNWTDSPGCQEKASYILMIMAHKAYGDRQAMIEAGIASSLLELMLLGTALAQKRASRILECLRLDKGKQVSGISVGNSSSTVSAPICGSSSSCAKPDGSGDECLEEEEDMMSDEKKAVKQLVQQSLQNNMRKIVKRANLPQDFVPSDHFKALTSGSTSKSLPF 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0674 512 Gene3D - 269 430 IPR011989 -
Lele25g0674 512 MobiDBLite consensus disorder prediction 430 445 - -
Lele25g0674 512 MobiDBLite consensus disorder prediction 51 106 - -
Lele25g0674 512 Gene3D - 113 268 IPR011989 -
Lele25g0674 512 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 24 512 - -
Lele25g0674 512 SUPERFAMILY ARM repeat 129 414 IPR016024 -
Lele25g0674 512 SMART arm_5 332 371 IPR000225 GO:0005515
Lele25g0674 512 SMART arm_5 159 199 IPR000225 GO:0005515
Lele25g0674 512 SMART arm_5 245 289 IPR000225 GO:0005515
Lele25g0674 512 SMART arm_5 290 328 IPR000225 GO:0005515
Lele25g0674 512 SMART arm_5 201 244 IPR000225 GO:0005515
Lele25g0674 512 Coils Coil 109 140 - -
Lele25g0674 512 MobiDBLite consensus disorder prediction 430 452 - -
Lele25g0674 512 Coils Coil 453 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0674 Lele-ChrLele25 4256202 4258206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0674 114 412 U-box Gene Family AT2G23140 32.667 2.97e-29 120
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0674 25 4256202 4258206 Lele02g0663 02 3981105 3983011 CCT
Lele25g0674 25 4256202 4258206 Lele03g0673 03 3968328 3970189 CCT
Lele01g0683 01 4016009 4024576 Lele25g0674 25 4256202 4258206 CCT
Lele02g0671 02 4029613 4033130 Lele25g0674 25 4256202 4258206 CCT
Lele03g0678 03 4023655 4027156 Lele25g0674 25 4256202 4258206 CCT
Lele04g0685 04 4167101 4170369 Lele25g0674 25 4256202 4258206 CCT
Lele25g0674 25 4256202 4258206 Lele27g1415 27 20425467 20427467 hybridization
Lele25g0674 25 4256202 4258206 Lele28g0666 28 4258456 4263795 hybridization