Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele25g0674 | ATGGCAAAGTATGACCGGAACAACGTCGGATCTCTGGTTCTCGACTATCACGATCCTACCAGGAATGCAACAGTCGGCGCCCACTGCCGCATATGGAATGCCTTGTCCGCTTCAACAGTACGCCGCATCATTTTTGACACTGTCAGCTGCGGTGGCTCTCGGCATCACCGCCATCACCGCCATCACCGTAATGACTTTGCCTCAACACCCTCGCCGATTTCATCAGACTCCGGGAACTCTAAGGACAAGTCGCAAGAACAGAGACAGGGTGCTTCCAAGTCTCAGCCGAAACCAAATGCCAAGTCGGAGAAACTATCGGATCTTCTGAATATAGCAGAGTCTGAAATTGACACCCAAACGAAGAAAAAAGAAGAGTCATTGCAGGAGCTGAAGAAAATTGTGAAGGAGTTACAGGTTGAGGATTTGACAAAGCGGCAAATGGCTGCGGCTAGCGTGAGATTGCTCGCAAAGGAAGACTTGGAAGTCAGAGGGACACTTGCAATGCTTGGAGCCATCCCTCCCCTGGTTGTAATGCTTGATTTGGAAGACGTCAATTCTCAGATCTCTTCTCTCTATGCGTTACTCAATCTTGGAATCGGCAACGACGCAAATAAGGCAGCCATTGTCAAAGTTGGTGCTGTTCACAAAATGCTAAAGCTCACTGGATCACCAAGTTGTTCAGATTCATCCGTCTCTGAAGCAGTTGTTGCAAATTTCCTTGGCTTGAGTGCTTTGGATACGAATAAACCAATAATTGGATCGTCGGGTGCGATTCCTTTCCTGTTTAGAACCCTGGAAAATTTACATGAAGGAACTAGCCCCCAGGCTAAGCAAGATGCTCTCCGAGCACTATACAATCTATCAATCTTCCCAGCTAACATCTCATTTATATTGGAAACGGATTTGGTTCCGTTTCTGATAAACGCAATAGGAGACATGGAAGTAAGTGAAAGAATTCTCTCAATCCTAAGCAATTTGGTATCAACCCCTGAGGCTCGAAAATCTATAAGTGCTGTGCGCGATGCATTCCCCATTCTGGTGGATGTATTGAATTGGACAGATTCACCTGGATGCCAGGAAAAAGCATCTTATATTCTGATGATTATGGCACACAAAGCCTATGGTGACAGGCAGGCCATGATCGAGGCTGGGATTGCCTCGTCATTGCTTGAGTTGATGCTTCTGGGCACTGCGTTGGCACAGAAAAGGGCCTCGAGAATATTGGAATGCTTAAGATTAGACAAAGGGAAGCAGGTATCCGGGATTTCTGTCGGAAACTCCAGTTCAACTGTATCTGCTCCCATTTGTGGCTCTTCATCATCTTGTGCGAAGCCAGATGGAAGTGGAGACGAGTGTTTGGAAGAGGAGGAAGATATGATGAGTGACGAGAAGAAGGCAGTGAAGCAATTAGTCCAGCAGAGTTTGCAAAACAACATGAGGAAAATTGTGAAAAGGGCAAATTTGCCTCAAGATTTCGTTCCATCCGACCATTTTAAGGCACTCACTTCAGGATCGACTTCAAAAAGCCTTCCATTTTGA | 1539 | 0.4626 | MAKYDRNNVGSLVLDYHDPTRNATVGAHCRIWNALSASTVRRIIFDTVSCGGSRHHRHHRHHRNDFASTPSPISSDSGNSKDKSQEQRQGASKSQPKPNAKSEKLSDLLNIAESEIDTQTKKKEESLQELKKIVKELQVEDLTKRQMAAASVRLLAKEDLEVRGTLAMLGAIPPLVVMLDLEDVNSQISSLYALLNLGIGNDANKAAIVKVGAVHKMLKLTGSPSCSDSSVSEAVVANFLGLSALDTNKPIIGSSGAIPFLFRTLENLHEGTSPQAKQDALRALYNLSIFPANISFILETDLVPFLINAIGDMEVSERILSILSNLVSTPEARKSISAVRDAFPILVDVLNWTDSPGCQEKASYILMIMAHKAYGDRQAMIEAGIASSLLELMLLGTALAQKRASRILECLRLDKGKQVSGISVGNSSSTVSAPICGSSSSCAKPDGSGDECLEEEEDMMSDEKKAVKQLVQQSLQNNMRKIVKRANLPQDFVPSDHFKALTSGSTSKSLPF | 512 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele25g0674 | 512 | Gene3D | - | 269 | 430 | IPR011989 | - | |
| Lele25g0674 | 512 | MobiDBLite | consensus disorder prediction | 430 | 445 | - | - | |
| Lele25g0674 | 512 | MobiDBLite | consensus disorder prediction | 51 | 106 | - | - | |
| Lele25g0674 | 512 | Gene3D | - | 113 | 268 | IPR011989 | - | |
| Lele25g0674 | 512 | PANTHER | ARM REPEAT SUPERFAMILY PROTEIN | 24 | 512 | - | - | |
| Lele25g0674 | 512 | SUPERFAMILY | ARM repeat | 129 | 414 | IPR016024 | - | |
| Lele25g0674 | 512 | SMART | arm_5 | 332 | 371 | IPR000225 | GO:0005515 | |
| Lele25g0674 | 512 | SMART | arm_5 | 159 | 199 | IPR000225 | GO:0005515 | |
| Lele25g0674 | 512 | SMART | arm_5 | 245 | 289 | IPR000225 | GO:0005515 | |
| Lele25g0674 | 512 | SMART | arm_5 | 290 | 328 | IPR000225 | GO:0005515 |
Showing 1 to 10 of 14 entries
Duplication type information
Functional genes information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele25g0674 | 25 | 4256202 | 4258206 | Lele02g0663 | 02 | 3981105 | 3983011 | CCT | |
| Lele25g0674 | 25 | 4256202 | 4258206 | Lele03g0673 | 03 | 3968328 | 3970189 | CCT | |
| Lele01g0683 | 01 | 4016009 | 4024576 | Lele25g0674 | 25 | 4256202 | 4258206 | CCT | |
| Lele02g0671 | 02 | 4029613 | 4033130 | Lele25g0674 | 25 | 4256202 | 4258206 | CCT | |
| Lele03g0678 | 03 | 4023655 | 4027156 | Lele25g0674 | 25 | 4256202 | 4258206 | CCT | |
| Lele04g0685 | 04 | 4167101 | 4170369 | Lele25g0674 | 25 | 4256202 | 4258206 | CCT | |
| Lele25g0674 | 25 | 4256202 | 4258206 | Lele27g1415 | 27 | 20425467 | 20427467 | hybridization | |
| Lele25g0674 | 25 | 4256202 | 4258206 | Lele28g0666 | 28 | 4258456 | 4263795 | hybridization |
Showing 1 to 8 of 8 entries