Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0662 ATGGGGAGTGCAAGTGAATACGTATTTGACGTAGGACGCGGTTTCAAATGGTTGTTGCCATCACAAAGCTCAGCAAAAGATGGCGATGTGACTGCCTTCACTTTGTCTTCCCCGAACTCTCTGGGATTTTGTTCCTCCACTCTTCAAACAAGGAAACAAAATGCGATATTACTTAGCAGGGACGGGGGTTTTCGTGTTTTTGGTGACATCTCCCTTCACCTCTCGGCGCCGGGGATCTCTGAAGACGAAGCGAAAATGCCGTCCCACAAGACCTTCAGAATCAAGAAGAAGCTGGCGAAGAAGATGAGGCAGAACAGGCCTATTCCCTACTGGATCCGCATGAGGACCGACAACACCATCAGGTACAACGCCAAGCGTCGACACTGGCGCCGCACCAAGCTTGGATTCTGA 411 0.5061 MGSASEYVFDVGRGFKWLLPSQSSAKDGDVTAFTLSSPNSLGFCSSTLQTRKQNAILLSRDGGFRVFGDISLHLSAPGISEDEAKMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0662 136 SUPERFAMILY Ribosomal protein L39e 88 135 IPR023626 -
Lele25g0662 136 PANTHER RIBOSOMAL PROTEIN L39E 78 136 - -
Lele25g0662 136 ProSitePatterns Ribosomal protein L39e signature. 115 131 IPR020083 GO:0003735|GO:0005840|GO:0006412
Lele25g0662 136 Hamap 50S ribosomal protein L39e [rpl39e]. 86 136 IPR000077 GO:0003735|GO:0005840|GO:0006412
Lele25g0662 136 Pfam Ribosomal L39 protein 94 134 IPR000077 GO:0003735|GO:0005840|GO:0006412
Lele25g0662 136 FunFam 60S ribosomal protein-like L39 86 136 - -
Lele25g0662 136 Gene3D Ribosomal protein L39e 86 136 IPR023626 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0662 Lele-ChrLele25 4163831 4165988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0662 86 136 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 90.196 2.71e-29 99.4