Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0635 ATGGCTAAAGAAGTCACTGCTAGTCCATCAACATCTTCGTTTGACTATGTGCTCTTGGGGGATGATCATGCGAATCTAAGCACTGTCAGAGGCACATCCGGCCACAGTAGTACATGGATTGAACCTGAGAGGTTGAAACTTCGGCACAGGATTGGCCGTGGACCGTTTGGTGATCTTTGGTTAGCAACTCATCATCAGTCAACTGAAGATTATGATGAATACCATGAAGTTGCTGCCAAGATGTTGTATACAATCAAAGAGGACAACTTGAGGATTGTATTAGAGAAATTTGATGAATTATATGATAAGTGCCAAGGAGTGGCTGGGGCTTGCTGGCTCCATGGAATTTCAATTTTAAACGGAAGGATATGCATCATTATGAATTTCTATGAGGGTTCTGTCGGTGACAAAATGGCTAGGCTCAGAGAAGAAAGGATTTCATTGCATGATGTGTTGAGGTATGGAATCAATCTGGCCCAAGGTATTATGGAACTTCATTCAAAAGGAATCTTAATTCTCAACCTTAAACCCTTTAATGTGCTTCTTGATAATAATGACCAAGCTATTTTGGGAGATTTTGGTATCCCCAGTCTTCTGCTTGGCCTCTCATTACAGGGCTCAGATATGGCTCACAGGCTGGGGACTCCAAACTACATGGCTCCAGAACAATGGCAACCTGAAGTCAGGGGCCCTATATCCTTTGAGACAGATTCATGGGGATTTGCGTGTACTATTGTGGAAATGTTGACTGGTGATCAACCTTGGTGCGGGAGATCGGTTGGTGAAATATACCAATTAGTAGCTAGAAAGCATGAAAAACCTCTTATTCCCAGTGGTCTTCCTCCTTCAATTGAGAATATCCTCAGCGGATGCTTTGAGTATGATTTAAGGAATCGTCCCTCAATGGTGCATATTCTGAGCGTATTTAAAAGCTCTCTGGATGTGTTAGCCAATGATGGAGGATGGCAATATCTCGGAACCATGAAGGTTGCTGAAAAATCAAGTAGCACGGGCTATACTGATTGGTTTCTTTTAAAGGATCGTCTCCAGGTGAATGACATGGTGAGATCTAGAAAACCGACCAATTCATGCAAAGGCCAAAACATGGATGTCCCGGAAGGAACTGTTGTTGGTTTAGAACGTAATGCAGATCATGGTTTTGTTTTAGTGAGGGTTCATGGTATACATGACCCTTCAAGGATTCATAGTTCAACTCTGGAGCGTGTCACATTTGGTTTGGCAGCTGGTGATTGGGTACGCTTGAAGGAAGAAGATGAGAAGCACTCGCCAGTAGGCATTCTGCATTCCATTAGCCGTGATGGTAGAGTGGCTGTTGGATTTATTGGAATGCAAACTCTTTGGACTGGTAGTTTTTCAGAACTTGAAATGGCAAAGCCTTACTGTATGGGGCAGTTTGTAAGGCTTAAAGTCAATGTTTTGAGTCCTCGATTTGAATGGCCTCGTAAAAGGGGAGGGGCCTGGCCTACTGGAAGGATATCATGGATCCTGCCAAATGGGTGTCTAATTGTCAGATTTCCAGGGATGTTGACTTTTGGGGATGAAGCTAGCACCTTCTTAGCTGATCCATCCGAGGTTGAAGCGGTTAACTTTAGTACTTGCCCTGGGATCATAGAGAAGTATAAACATGTAGAGGACCATCACTGGTTGGTCAGACCTGTACTAATTGCATTTGGCCTGTTTACAGCTTTGAAATTAGGCTTGTCAATTGGAAAGAAAATGGGGAAGAAGAAGAACAAGGTGCACGCAAAAGAGAGCGAAAATCAGCACATAGATGGCCAGAATGCTAGCAACTCTGCCTGGAGATCTTCTGGTGCTGTAAATCGTGGCAACGCAGTATGGGTTCCTTCAGTTTCCAATATTCTTTTCAGAGAAGGCTCTAGTGCACAAACTGGTCGATAG 1920 0.4359 MAKEVTASPSTSSFDYVLLGDDHANLSTVRGTSGHSSTWIEPERLKLRHRIGRGPFGDLWLATHHQSTEDYDEYHEVAAKMLYTIKEDNLRIVLEKFDELYDKCQGVAGACWLHGISILNGRICIIMNFYEGSVGDKMARLREERISLHDVLRYGINLAQGIMELHSKGILILNLKPFNVLLDNNDQAILGDFGIPSLLLGLSLQGSDMAHRLGTPNYMAPEQWQPEVRGPISFETDSWGFACTIVEMLTGDQPWCGRSVGEIYQLVARKHEKPLIPSGLPPSIENILSGCFEYDLRNRPSMVHILSVFKSSLDVLANDGGWQYLGTMKVAEKSSSTGYTDWFLLKDRLQVNDMVRSRKPTNSCKGQNMDVPEGTVVGLERNADHGFVLVRVHGIHDPSRIHSSTLERVTFGLAAGDWVRLKEEDEKHSPVGILHSISRDGRVAVGFIGMQTLWTGSFSELEMAKPYCMGQFVRLKVNVLSPRFEWPRKRGGAWPTGRISWILPNGCLIVRFPGMLTFGDEASTFLADPSEVEAVNFSTCPGIIEKYKHVEDHHWLVRPVLIAFGLFTALKLGLSIGKKMGKKKNKVHAKESENQHIDGQNASNSAWRSSGAVNRGNAVWVPSVSNILFREGSSAQTGR 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0635 639 PANTHER OS06G0639500 PROTEIN 1 635 - -
Lele25g0635 639 Pfam Protein tyrosine and serine/threonine kinase 45 307 IPR001245 GO:0004672|GO:0006468
Lele25g0635 639 MobiDBLite consensus disorder prediction 585 609 - -
Lele25g0635 639 SUPERFAMILY Protein kinase-like (PK-like) 42 308 IPR011009 -
Lele25g0635 639 ProSiteProfiles Protein kinase domain profile. 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0635 639 Gene3D Transferase(Phosphotransferase) domain 1 22 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0635 Lele-ChrLele25 4011376 4014353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0635 124 311 MAP Kinase Kinase Kinase AT3G22750 25.397 6.49e-18 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lele25g0635 PK_Tyr_Ser-Thr 2.8e-28 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0657 01 3840760 3847299 Lele25g0635 25 4011376 4014353 CCT
Lele03g0657 03 3848887 3851103 Lele25g0635 25 4011376 4014353 CCT
Lele25g0635 25 4011376 4014353 Lele27g1449 27 20672253 20675231 hybridization
Lele25g0635 25 4011376 4014353 Lele28g0633 28 4034251 4037242 hybridization