Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0630 ATGAAAAGAACCTGGTCTTTCATCCATATCATCGGCGTTCTGTTCCTGTGTAATCTACTCTTGTCTGAAATCTGTCTGGCTGGCACTCAGACAAGCGACCCGATCTCTCCGGGGTTTGAAGGCTCTCAAATGAATTGGATTGACAAAAACGGCATGTTTCTCGTGTCAAACAATGGAGAATTTATGTTTGGCTTCATCACTACCCCGAAAGACAACACGTTATATCTTCTAGTAATCGTCCACGGTGACAATACCCAAGTGGTTTGGACGGCAAACAGAGGCCTCCCTGTTAGTAATTCTGATAATTTTGTGTTCGACAAAACTGGTAATGTCTTTCTAAAGAAAGGAAACGATGTAGTTTGGTCTACCGATACGAAGGGCAAAGGAGTTTCTTCAATGAAGTTACAGGATACAGGAAACTTGGTGTTGCTTGCTGATGATAATAGTACAATTTGGGAGAGTTTCAGCCATCCAACTGATACCTTATTGCCAATGCAGGAATTCAAAGAGGGAATGAAACTTATCAGTGAACCGGACCAATATAACTTAACCCATGTTCTGGAGATCAAATCTGGCGATTTAGTTCTCTCTGCTGGTTTTCAAAACCCACAGCCTTATTGGTCTATGCAGAATGAAAACCGCAAAATCATCGATAAAGATGGTAACGCGGTGGTTTCAGCCTCCATTAGTGCAAAGTCGTGGAGGTTCTATGATAAAAATAAATCTTTGTTATGGCAGTTCATTTTTTCTGAAGATTCATCATCAGGAACAAATTCCACTTGGGTTGCTGTTCTGGGAAGTGACGGTTTCATCGCTTTCTCTAATCTCAACAGTGGAGGTTCAATTACTCCCTCGCCAACAAAAATCCCAAAAGATTCTTGTAGCACACCTGAACCTTGTGGTCCTTATTCCATATGCACGGATGATAACAAGTGTCTTTGTCCTTCGGCTCTGAGATCTCGTCCCAATTGCAAACCAGGTGTTGTCTCTTCTTGTGATGACTCAAATGGATCCGTAGAGCTTGCAGAAGGTGATCATGGACTTGGTTACTTCGCTCTTGGATTCCTTTCACCATCCTCCAAAACTGATTTGGGTGGCTGTAAATCTTCCTGCCTAGGAAATTGCTCATGTCTCGCCATGTTCTTCCACAACAATTCAGGGAACTGTTTCATGTTGGATAATATAGGAAGCTTTGAGAGTTCTGGTACAGATTCAGGTTTTGCTTCTTACATTAAGGTCTCGAGTAACGGAGGATCTAGTTCTTCAGGGGATGGAAGCAACAAGAAGCAGACTGTGGTGGTTGTGGTTATCATCATAACAACGTTGCTTGTCATTTTGGGTTTGCTCTATGTGGGATTTAGATGCTACAGAAGAAAGCAAAAATTGCCTGAGTCTCCAAGAGGGAGTTCAGAAGAGGACAATTTCTTGGCGAATTTGGCTGGTATGCCTGTCCGTTTCATCTATAAAGAACTGCAAACAGCTACTAAGAACTTCTCTGAGAAGCTTGGGCATGGAGAGAAAAGCGATGTATATAGCTACGGGATGGTGTTACTTGAGATCATTGGTGGAAGGAAAAACTATGATCCTAATGAGTCTTCAGAGAAATCCCACTTCCCATCCTTTGCTTTCAAGATGATGGAAGAAGATAAGTTGAAAGAACTTCTTGATTCGAAGTTGAGAATAGATGAAAATGATGAAAGGTTTCATATTGCCATCAAAGTTGCATTGTGGTGCATACAAGAAGACATGTCTCTGAGGCCCTCCATGACCAAAGTTGTTCAGATGCTTGAAGGTCTCTGTACTGTTTCTAAGCCACCATCTTCTTCTCCCATGGGTTCTCGCCTTTACTCATCTTTCTTCAAATCCATTAGTGAAGGTGGCACCTCTTCAGGACCGTCGGACTGTAATAGTGATACATATCTTTCAGCAGTTAGGCTTTCAGGACCAAGATAA 1953 0.4214 MKRTWSFIHIIGVLFLCNLLLSEICLAGTQTSDPISPGFEGSQMNWIDKNGMFLVSNNGEFMFGFITTPKDNTLYLLVIVHGDNTQVVWTANRGLPVSNSDNFVFDKTGNVFLKKGNDVVWSTDTKGKGVSSMKLQDTGNLVLLADDNSTIWESFSHPTDTLLPMQEFKEGMKLISEPDQYNLTHVLEIKSGDLVLSAGFQNPQPYWSMQNENRKIIDKDGNAVVSASISAKSWRFYDKNKSLLWQFIFSEDSSSGTNSTWVAVLGSDGFIAFSNLNSGGSITPSPTKIPKDSCSTPEPCGPYSICTDDNKCLCPSALRSRPNCKPGVVSSCDDSNGSVELAEGDHGLGYFALGFLSPSSKTDLGGCKSSCLGNCSCLAMFFHNNSGNCFMLDNIGSFESSGTDSGFASYIKVSSNGGSSSSGDGSNKKQTVVVVVIIITTLLVILGLLYVGFRCYRRKQKLPESPRGSSEEDNFLANLAGMPVRFIYKELQTATKNFSEKLGHGEKSDVYSYGMVLLEIIGGRKNYDPNESSEKSHFPSFAFKMMEEDKLKELLDSKLRIDENDERFHIAIKVALWCIQEDMSLRPSMTKVVQMLEGLCTVSKPPSSSPMGSRLYSSFFKSISEGGTSSGPSDCNSDTYLSAVRLSGPR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0630 650 CDD PAN_AP_plant 328 413 - -
Lele25g0630 650 Pfam Protein tyrosine and serine/threonine kinase 504 596 IPR001245 GO:0004672|GO:0006468
Lele25g0630 650 Gene3D - 45 157 IPR036426 -
Lele25g0630 650 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 45 505 - -
Lele25g0630 650 ProSiteProfiles Bulb-type lectin domain profile. 39 156 IPR001480 -
Lele25g0630 650 Gene3D Transferase(Phosphotransferase) domain 1 481 607 - -
Lele25g0630 650 Pfam D-mannose binding lectin 87 169 IPR001480 -
Lele25g0630 650 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 176 IPR036426 -
Lele25g0630 650 FunFam Serine/threonine-protein kinase 41 156 - -
Lele25g0630 650 CDD B_lectin 47 158 IPR001480 -
Lele25g0630 650 SUPERFAMILY Protein kinase-like (PK-like) 503 621 IPR011009 -
Lele25g0630 650 SMART blect_4 45 158 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0630 Lele-ChrLele25 3972293 3974755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0630 502 608 Receptor kinase-like Gene Family AT5G20050 46.154 3.97e-18 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele25g0630 PK_Tyr_Ser-Thr 6.7e-06 CL0016