Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0617 ATGAATTCGAGTTCGTCGGAGCCGTCGTCTGCGATGAACAAGATAGGAAGGGTATTGTACCATCAAAGGGTTAAGGCGTGGCCGACCTTAATCAGCACTGAATTCACTATGAGGATCGCTCCCATGGATAATTCATCAATAATTTCTGGTGCTGGTCTTACTTTCGTTTTTGCAAGTGAACTTCTGCAACAAATAGCTGTTGAGTTTGACACATACAAGAATGAGTTTGATAGAGATGGAAACCACGTTGGGATAGTCACGGGAAGCATCATAAGACCAGTTACTACAGAGAGTCTAAATTCCATTGGAATTAAACTAAACAGTGGACAATCCATTCAGGCCAAAATAGAGTTCGATGGTTCCATTAACATGCTTTATGCCTCCCTCGGATACTCCGAAAGTCAGTTAAAGAGCGTTCTTAACGTCTCAATCGATCTGCCAAATATTGTCCCAAACGCAGTTTATGTTGGTTTCACAGCTTCAACGGGCAACACTTTGCCTGAAAGCCATGAAATCCTGAATCGGGTGTTCACATCAGTGCCTTTGCCCTCATATCCTAATAATAAACCCAGCAAAAACGAGACCATTAAGACCATTCTGATCATTAATGTCATACCCATTTCTCTGGTCATCTTGGCAAGCTTAATTCCATTTATCTGGGAAAACTTGCAGAAAAGAAACAAGAATGAGATCTGTCACAGGCAAGATGAAATAGAATGCTCATCAATGACTGCTCTAGATATCCCCAAAGAGTTCACTTTCAAGCGATTGTCTAATGCTACTAGCAGCTTCGGCAAGGAGAATCTTTTAGGAAGAGGTGGATTTGGTAGTGTTTATAAGGGCCTCCTACTTAATCCTCCAAAAATCATAGCAGTCAAGAAGATTTCAGCAAATTCCAAACAAGAAGTCGGTTTCACAGGGAAAGCAACCCCAGAATCAGATGTTTACAGTTTTGGGATGGTAGTTCTTGAAGTTATATGTGGAAAAAGATCAAAGAGCACAGCAGGAGATCAGTTCAGTCTGGCGGACTATGTTTGGAATATGCATAGCGAGAATGCATTGATTGAGTGTGTGGATGAACTATTAAAAGACGATTTCGATGAGGAAGAAGTGAGAAGAGCAATGATGGTTGGGTTGGCTTGTTTGTCTCCGGATTCAATGTCAAGGCCAAAAATGAGAAAAGTGGTGCACGTTTTGCTGGATCCAAGCGAGCCTTTGATGGAATTACCAGGAGTGAGACCTCTTGGAGTTTATGTGTCAGTTTCTTCATCTTTTTCGGCCTCCAACTTCGGTTCCAGAGGTTTGTATTCATATCCGCTGCCTCAATCGGGAACAACATCGTTAGATGAAATTAATATTGTGTACGATCAACGGTGA 1377 0.4176 MNSSSSEPSSAMNKIGRVLYHQRVKAWPTLISTEFTMRIAPMDNSSIISGAGLTFVFASELLQQIAVEFDTYKNEFDRDGNHVGIVTGSIIRPVTTESLNSIGIKLNSGQSIQAKIEFDGSINMLYASLGYSESQLKSVLNVSIDLPNIVPNAVYVGFTASTGNTLPESHEILNRVFTSVPLPSYPNNKPSKNETIKTILIINVIPISLVILASLIPFIWENLQKRNKNEICHRQDEIECSSMTALDIPKEFTFKRLSNATSSFGKENLLGRGGFGSVYKGLLLNPPKIIAVKKISANSKQEVGFTGKATPESDVYSFGMVVLEVICGKRSKSTAGDQFSLADYVWNMHSENALIECVDELLKDDFDEEEVRRAMMVGLACLSPDSMSRPKMRKVVHVLLDPSEPLMELPGVRPLGVYVSVSSSFSASNFGSRGLYSYPLPQSGTTSLDEINIVYDQR 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0617 458 ProSitePatterns Legume lectins beta-chain signature. 65 71 IPR019825 -
Lele25g0617 458 ProSiteProfiles Protein kinase domain profile. 264 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0617 458 Gene3D Phosphorylase Kinase; domain 1 249 306 - -
Lele25g0617 458 Gene3D Transferase(Phosphotransferase) domain 1 307 401 - -
Lele25g0617 458 SUPERFAMILY Protein kinase-like (PK-like) 249 299 IPR011009 -
Lele25g0617 458 SUPERFAMILY Protein kinase-like (PK-like) 302 418 IPR011009 -
Lele25g0617 458 Pfam Legume lectin domain 65 182 IPR001220 GO:0030246
Lele25g0617 458 Gene3D - 1 201 - -
Lele25g0617 458 SUPERFAMILY Concanavalin A-like lectins/glucanases 11 180 IPR013320 -
Lele25g0617 458 ProSitePatterns Protein kinases ATP-binding region signature. 270 294 IPR017441 GO:0005524
Lele25g0617 458 PANTHER - 305 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0617 Lele-ChrLele25 3910855 3913336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0617 302 399 Receptor kinase-like Gene Family AT3G55550 39.000 5.25e-15 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele25g0617 Lectin_legB 3.5e-23 CL0004