Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0613 ATGGCTCTCGCGGTTTCTTCATCTTTATGCACAAAATCCTTGGCCGTTCAATGTTTCCCATCCTCTCGAAGTGAACGTTTCATTGTGGGTGGCCTGACCTTTTCGCGTAGACCTTTGTCCTTCCCCGTCCTCGTATACCCTCGTGGTCGAGACCTCAGCTCTGCGATTGTTGCTGCATCTTCTTCTCGTAAAAAGAAAAAGAAGCAAAATTTGTCTCAAAACCACGTTAAAGTGGAGGATGAGGAAGAGGACGCTTTTGAGCTTCTTTTCAAGCAACTGGAAGAAGATCTCAAAAATGACGATATGACCTTAAATGATAGTGATGATGAAATAACCGAGGAAGACCTTGCCATGTTGGAACGGGAGTTAGAGGATGCGCTGGGGGAAGATGATGCGGAAATGTTAAACTCAGTCTTAAATGATACCAAAACTGATGTTGATGCTGAAGAAGAAGAAGAAGATGGGAGGCAAGTGACCCTTCGAAGCTGGCAACTACGGAAATTAGCTAAAGCTCTAAAAGCAGGTCGTCGCAAAACCAGTATCAAAAGTCTTGCTGCCGAGCTTTGTCTTGATAGGGCCTTTGTTCTTGAGTTGCTCCGTGACCCTCCTCCAAATCTTTTAATGATGAGTCTGTCGTTACCTGATGAACCGGCAGCACCAGTAGTAGAATCTGAAGCTAAACCCTCAGAGAGTGTTCTTGAAGAAATAGGCACAGATCACGTAGAGCCTGAGTCAAAGTATAATGTACCTGTTCATGTTATGCAACATAGATGGTCTGCTCAGAAGAGATTGAAAAGGGTACACGTTGACACTCTGGAAAGAATTTATAGGAGAACAAAGCGGCCCACTAATGCAATGATCAGTAGCATCGTGCATGTGACCAACCTTCCTCGGAGGAGAGTGGTCAAATGGTTTGAAGATAAACGTGCCGAGGATGGTGTTCCCGAAGATCGTGCTCCATACCGGCGTTCTGTTTTAATGGAGGTGGTGAGGTGGGGATACTAAACTCTCCTCTCTCTCTCTCTCTGCTTCTATTATTTTATTCTGTTGACCAAAATGCAGGACCCGGCTCTGGCCACCACGAGCTCTCTGCCTTCAAGCAGTGAAAAATCCTCCAGTTCTGCCCTCCACCTCGAACTCAAAGAAGGACCGGAGAGCGACGAGGAGATCAGAAGGGTGCCGGAGTTCGGCGGTGAATCCGCCGGAACGTCTGCTTCCCGGCCGGACCCCTCTGGAGGAGTGGCTCGGGGGAGAGGAGAGAGTCAGAGGAAGAAAGGTAGAAGCGCTGCCGACAAAGAAACCAAGCGCCTCAAGAGGTTGCTGAGGAACAGAGTTTCGGCTCAGCAAGCAAGAGAGAGGAAGAAAGCATACTTGAGTGATTTGGAAACAAGGGTTAAAGACTTGGAGAAGAAGAATACGGAGCTGGAAGAAAGACTATCCACTTTGCAGAACGAGAATCAGATGCTAAGACATATACTGAAGAACACAACTGCAAGCAGAAGAGGAGGCAGTGGTGGTGGTGGTGTAAATGAAGGAACTTTATGA 1545 0.4731 MALAVSSSLCTKSLAVQCFPSSRSERFIVGGLTFSRRPLSFPVLVYPRGRDLSSAIVAASSSRKKKKKQNLSQNHVKVEDEEEDAFELLFKQLEEDLKNDDMTLNDSDDEITEEDLAMLERELEDALGEDDAEMLNSVLNDTKTDVDAEEEEEDGRQVTLRSWQLRKLAKALKAGRRKTSIKSLAAELCLDRAFVLELLRDPPPNLLMMSLSLPDEPAAPVVESEAKPSESVLEEIGTDHVEPESKYNVPVHVMQHRWSAQKRLKRVHVDTLERIYRRTKRPTNAMISSIVHVTNLPRRRVVKWFEDKRAEDGVPEDRAPYRRSVLMEVVRWGYXTLLSLSLCFYYFILLTKMQDPALATTSSLPSSSEKSSSSALHLELKEGPESDEEIRRVPEFGGESAGTSASRPDPSGGVARGRGESQRKKGRSAADKETKRLKRLLRNRVSAQQARERKKAYLSDLETRVKDLEKKNTELEERLSTLQNENQMLRHILKNTTASRRGGSGGGGVNEGTL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0613 514 MobiDBLite consensus disorder prediction 495 514 - -
Lele25g0613 514 MobiDBLite consensus disorder prediction 380 395 - -
Lele25g0613 514 CDD homeodomain 258 310 IPR001356 GO:0003677
Lele25g0613 514 Pfam Homeodomain 265 310 IPR001356 GO:0003677
Lele25g0613 514 SMART HOX_1 262 319 IPR001356 GO:0003677
Lele25g0613 514 CDD bZIP_HY5-like 436 487 - -
Lele25g0613 514 FunFam Transcription factor HY5 454 495 - -
Lele25g0613 514 MobiDBLite consensus disorder prediction 359 435 - -
Lele25g0613 514 Gene3D - 257 315 - -
Lele25g0613 514 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 438 453 IPR004827 GO:0003700|GO:0006355
Lele25g0613 514 SUPERFAMILY Leucine zipper domain 435 493 IPR046347 GO:0003700|GO:0006355
Lele25g0613 514 Pfam bZIP transcription factor 432 492 IPR004827 GO:0003700|GO:0006355
Lele25g0613 514 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 60 365 - -
Lele25g0613 514 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 433 496 IPR004827 GO:0003700|GO:0006355
Lele25g0613 514 Coils Coil 430 492 - -
Lele25g0613 514 SUPERFAMILY Homeodomain-like 260 314 IPR009057 -
Lele25g0613 514 SMART brlzneu 431 495 IPR004827 GO:0003700|GO:0006355
Lele25g0613 514 ProSiteProfiles 'Homeobox' domain profile. 255 315 IPR001356 GO:0003677
Lele25g0613 514 Coils Coil 132 152 - -
Lele25g0613 514 Coils Coil 109 129 - -
Lele25g0613 514 MobiDBLite consensus disorder prediction 418 435 - -
Lele25g0613 514 MobiDBLite consensus disorder prediction 359 374 - -
Lele25g0613 514 Gene3D Single helix bin 454 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0613 Lele-ChrLele25 3885794 3890795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0613 375 492 bZIP Transcription Factor Family AT5G11260 72.358 6.53e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele25g0613 bZIP_1 3.3e-14 CL0018