Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0607 ATGCGATTAGTGGCTCTGCGTTTCTCAGGTGAACCAAAGACAATGGCAAAGAAGAAGAATCCCCTGGTTTTTATGGATGTCTCTATAGATGGGGACCCTGTTGAAAGGATGGTTTTTGAGCTGTTCTATGACATTGCTCCCAAGACTGCAGAAAATTTCCGTGCACTATGTACAGGAGAAAAGGGAGTCAGTCCAAGTACTGGGAAGCCACTGCATTATAAGGGTTCCTTCTTTCATCGCATTTTAAAAGGCTCCATTGCAGAGGGAGGTGATTTTGTCAAAAGAAACGGGACTGGTGGAGAAAGCATATATGGCTCGAATTTCCCAGACGAGTCACCCAAGCTTAAGCATGATGCACCAGGTCTCCTGTCTATGGCAATTGCTAATCGTGGTACTTTTGGTTCTCACTTTATGATCACATTTAAAGCTGATCACCATCTTGACAGGAAGCATGTGGTCTTTGGGAAGCTTGTTCAAGGACTTAATATATTGAAGAAAGTTGAAGATGTGGGTGATGAAGATGGGCGTCCAACTGTAACTGTTAAAATCATCAATTGTGGTGAATATAATGAAGATGGAAAGAAGATGAATAAATTGACTTCTGAAACCAATAATCATGAAGCACGGCGGAAGGGAAAGCGCAAAAAATCTTCTAGAGACAGAAGGAAAAGGAGAAAAAGATACTACTCATCTGAATCAGAGAGTTATTCAGATTCAGACATGGAATCATCAGAATCTGATAGTGAGTCTGACTCAGATCTGTCATCATCATCTTACATAAGTTCTTCCAGTGATGACAGGCGGAAAAAGAGAAAAAGATCTTCTAGGAAAGACAAACATAGACGCCGAAAAAGAAGGGATAGGCGTCGGGACAAGAGGCGACGTAGACGAGATAAAAGATCAAAGCGCAGATCTAGAAGGGATTCGGACAGTGCTACTGATTCAGATAGTGAAAGCAATGGTGACAGCGGCTCTGATGATGAAAGTATTGATGCTCAAGGGAAGGAGAAAAAGCGCAGAGATTATTCTCTGAAAAATGCTGAAGTTCAGTCTCCTCTAGCTGGGGATAGAGAAGTACATTCCATGCATCATAAAAGGAGGGGAGAAGTGGACACACCAGAGAATGAGGATGCATCCCCCAAAGAAAATGGAGAACGTCATAGCAATGGTATTGGAGCTGACTCTAGATCTGATAGAAGTGAGGAGAGGCAGCCTGATGTGATGGATGATAATCCTGGAAAATCTAGGAGTCGAAGCATGAGTCCCAAGAGGACCATGAGTAAGAGTATGAGCATTAGTCCCAGGAGAAGTGAGAGCAAGAGCCCAAGTGCGAGCTCAGAAAGGAAGATTAGCAGAAGTCCTAGTGGTAGTAGAAGCCCCCAAGCTCTATCTAGGAGGAGTTTAAGCAGAAGTCCTGCCAGGAGCATCAGCAGAAGCCCCAGCAGAAGCATCAGCAGAAGCCCAGTGACGGCTACAAAGGGAAGAATTGTCGGTAGGAGCCCCGTCAGTAGGAGCCCCGTGAGAACCTGCTCACGAAGAAGTGTCAGTGTGAGTCCTGTGAGATCCCCATCTCGTAGCCACCGGAGCAGGAGTTCACCTAGAATATCATCAAGAAGATCTGCTAGTAGAAGCCCTGTAAGGGTTTCAAGGAGGAGTACAAGCAGGAGTCCAGTTAGATCTTCTGCAAGGAGTTTGAGCAGAAGCTCTGGCAGGGTCCCATCAAGGAGAGGTGTCAGCCGAAGTCCTGTGAGGGCACCTAGCAGAGGAAATCATCGCAGCTATTCTAGGAGTCCTAGTCCTGGTCATAGGCCTAAATCATCTCGTGGATTGTCGAGGAGTGTCTCTCCTGATGTATCCCCAAAGCGTATCAGAAGGGGTAGAGGTTTTAGTGAGAGATACTCTTATGCAAGAAGGTATCAAACCCCTTCTCGATCTCCTGTGAGGTTTTATCGGTACAATGGAAGAAGTGACCGAGACAGATATTCTAGTCACAGAAGGTATTCCCCTAGGCGCTACAGAAGCCCTCCACCTCGAGGAAGAACGCCGCCCAGGTACCGAAGCAGAAGAAGCAGGACTCCCTCAGTATCTCGCAGCCCTCGCTATCGTGGTCGCCGCTACACCCGAAGCATAAGCCGAAGCCGCAGTCGTTCCCCTGTTGACCCATACAGATCTCGTCCATCGACTCGTGCGGAGAAGCGCAGGTCATCTTCTCGAAGTATAAGCCACAGTCTATTGCAGTCTAGGTCTTCTGTTGAATCACAGTCTCCTCTAAGGGCAAGTAAAGACAGATCAAGGTCATCCTCCCAAAGCCCAGATGGAAAGAAAGGCTTGGTCTCATATGGTGATGGTTCTCCATATTCAGACCAAAGGTGA 2373 0.4669 MRLVALRFSGEPKTMAKKKNPLVFMDVSIDGDPVERMVFELFYDIAPKTAENFRALCTGEKGVSPSTGKPLHYKGSFFHRILKGSIAEGGDFVKRNGTGGESIYGSNFPDESPKLKHDAPGLLSMAIANRGTFGSHFMITFKADHHLDRKHVVFGKLVQGLNILKKVEDVGDEDGRPTVTVKIINCGEYNEDGKKMNKLTSETNNHEARRKGKRKKSSRDRRKRRKRYYSSESESYSDSDMESSESDSESDSDLSSSSYISSSSDDRRKKRKRSSRKDKHRRRKRRDRRRDKRRRRRDKRSKRRSRRDSDSATDSDSESNGDSGSDDESIDAQGKEKKRRDYSLKNAEVQSPLAGDREVHSMHHKRRGEVDTPENEDASPKENGERHSNGIGADSRSDRSEERQPDVMDDNPGKSRSRSMSPKRTMSKSMSISPRRSESKSPSASSERKISRSPSGSRSPQALSRRSLSRSPARSISRSPSRSISRSPVTATKGRIVGRSPVSRSPVRTCSRRSVSVSPVRSPSRSHRSRSSPRISSRRSASRSPVRVSRRSTSRSPVRSSARSLSRSSGRVPSRRGVSRSPVRAPSRGNHRSYSRSPSPGHRPKSSRGLSRSVSPDVSPKRIRRGRGFSERYSYARRYQTPSRSPVRFYRYNGRSDRDRYSSHRRYSPRRYRSPPPRGRTPPRYRSRRSRTPSVSRSPRYRGRRYTRSISRSRSRSPVDPYRSRPSTRAEKRRSSSRSISHSLLQSRSSVESQSPLRASKDRSRSSSQSPDGKKGLVSYGDGSPYSDQR 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0607 790 MobiDBLite consensus disorder prediction 504 526 - -
Lele25g0607 790 MobiDBLite consensus disorder prediction 586 614 - -
Lele25g0607 790 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 23 188 - -
Lele25g0607 790 MobiDBLite consensus disorder prediction 357 417 - -
Lele25g0607 790 MobiDBLite consensus disorder prediction 269 303 - -
Lele25g0607 790 MobiDBLite consensus disorder prediction 191 790 - -
Lele25g0607 790 MobiDBLite consensus disorder prediction 328 345 - -
Lele25g0607 790 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 15 196 - -
Lele25g0607 790 MobiDBLite consensus disorder prediction 618 632 - -
Lele25g0607 790 MobiDBLite consensus disorder prediction 739 774 - -
Lele25g0607 790 MobiDBLite consensus disorder prediction 209 226 - -
Lele25g0607 790 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 25 187 IPR002130 GO:0000413|GO:0003755
Lele25g0607 790 MobiDBLite consensus disorder prediction 535 575 - -
Lele25g0607 790 Gene3D - 10 196 IPR029000 -
Lele25g0607 790 SUPERFAMILY Cyclophilin-like 16 191 IPR029000 -
Lele25g0607 790 MobiDBLite consensus disorder prediction 418 490 - -
Lele25g0607 790 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 24 188 IPR002130 GO:0000413|GO:0003755
Lele25g0607 790 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 148 IPR002130 GO:0000413|GO:0003755
Lele25g0607 790 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 149 164 IPR002130 GO:0000413|GO:0003755
Lele25g0607 790 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 56 IPR002130 GO:0000413|GO:0003755
Lele25g0607 790 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 78 90 IPR002130 GO:0000413|GO:0003755
Lele25g0607 790 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 136 IPR002130 GO:0000413|GO:0003755
Lele25g0607 790 MobiDBLite consensus disorder prediction 191 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0607 Lele-ChrLele25 3851812 3858023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0607 39 184 U-box Gene Family AT5G67530 42.568 1.04e-22 101