Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0596 ATGGAGAAGAACGAAGTGACCAGAGTTAATAGTTTACGTGAAATCACCAGAGCTGAGAGCCTACGCAAGAATGGTTCTAAAGTTTGGAGGAGTAATAGCATGGAAATGTTCTCAAGCTCTGCTCGTGAAGATGATGAAGAAGCTCTTAAGTGGGCAGCAATAGAGAGACTTCCTACGTATCTGCGCATAAGGAGAAGCATACTCACTAATGATGAAGGTAATGCTAAAGAAATCGATATCAAGCAACTGGGATTAACAGAGAGGAAGATTCTGTTGGATAGGCTCCTGAAATTAGCAGAACAAGATAATGAACAGTTTTTGTTGAAACTTAAGAAACGCATGGACCGAGTTGGACTTGAGATTCCAACAATTGAAGTTCGATTTGAGCATATAAATGTGGAGGCAGAGGTCTACGTTGGAAGCAGAGCATTGCCTACAGTGTTCAACTTCTATGTGAATGTCTTAGAGGAATTCCTAAATTATCTCCACATCATTCCAAGTCCAAAAAAACCACTACATATCCTTCAGAATGTTAGTGGAATCATAAAGCCTCAAAGAATGACATTGCTTTTAGGGCCCCCAGGCTCTGGAAAGACTACTCTGCTATTGGCCCTGGCTGGAAAACTCAGTAAGGATTTAAAATATTCTGGGAGAGTCACATATAACGGTCATGGGCTGGACGAGTTTGTGCCACAGAGGACATCAGCTTATATTAGTCAAGATGATATCCACATTGGAGAAATGACTGTGAGAGAAACACTTTCTTTCTCTGCCAGATGTCAAGGGGTTGGACAGAACTATGAGATGCTGGCAGAGCTACTTAGAAGAGAGAAGGAAGCAAAGATCAAACCAGACCCTGATATTGATGCCTACATGAAGGCGGCAGCATTAGAAGGGCAGGAAACAAATGTTGTCACTGACTACATTCTGAAGATTTTGGGACTCGAAGTATGTGCTGATATTATGGTAGGAGATGGAATGATAAGAGGTATCTCAGGTGGACAGAAAAAGCGAGTTACAACAGGAGAGATGCTGGTGGGACCTGTAAGAGTGTTATTCATGGATGAGATATCAACTGGTTTGGACAGCTCAACAACTTTTCAAATTATCAATTCAATCCGACAATCAATCCATATTCTCAATGGAACTGCACTTGTTTCTCTCCTACAGCCAGCACCAGAGACTTATGAGCTATTTGATGATATAATACTTCTAACAGATGGGCAAATTGTGTACCAAGGTCCCAGGGAGAAAGTACTTGACTTCTTTGAATCTATGGGTTTCAAGTGTCCCGAAAGAAAAGGAGTTGCTGATTTCTTACAAGAAGTGACATCAAGGAAAGATCAATGGCAGTACTGGGCACGTAAAGATGAACCTTACAGTTTCGTTACTGTCAAGGATTTTGTCGAAGCCTTCCAGTCATTCCACGTTGGTCATGAACTTGGTGAAGAACTAGCTAAGCCTTTCGACAAGACCAAATGCCACCCGGCTTCCTTGAGCACACAAAAATATGGTGTTAGCAAGAAGGAGCTGTTTAGAGCTTGTATTAGCAGAGAATTTTTGCTTATGAAGAGAAATTCATTTGTCTACATATTCAAACTGACCTTACTTAGCTATTTAGCAATCACGACAGCAACGTTATTTCTACGAACTAAGATGCATAAAGATACTGTTGCGGATGGAGGAACTTATATGGGTGCTCTGTTCTTCGCAATCATTGTAGCTATGTTCAACGGAATATCAGAGCTAAACATGACGATCATGAAACTGCCCATCTTCTACAAGCAAAGAGACCTTCATTTCTATCCTTCATGGGCCTATTCCCTACCACCATGGATCCTCAAAATACCATTCAGCCTGGTAGAAGTTGCCATTTGGGAAGCAATAAGTTATTATGTCATTGGCTTCGATCCCAATATTACAAGATTTTTCAAACAGTGCCTGCTACTCTTGTGCCTTAACCAGATGGCATCTGCACTATTTCGAACGATGGCGGCATTAGGACGGGATATAGTAGTTGCAAACACTGTTGGGTCGTTCGCTTTACTTGTCGTCATGGTTTTGGGAGGATTTGTGATTTCACGAGAGGATGTCCACAAATGGTTCCTGTGGGGCTACTGGTCCTCGCCACTTATGTACGCACAGAATGCTATTGCCGTCAATGAATTCCTCGGACATAGTTGGAGAAAGGTTATTGCTGGTAGGAATGAAACATTGGGAGTTATGGTACTGAAAGCTCGTGGGTTTTTCCCCGAAGCTTATTGGTATTGGATTGGAGTAGGAGCTTTGATTGGTTATGCCTTCCTATTTAATTTCCTCTACACACTGGCTCTGCAATATCTCAGTCCATTCAGAAAGGCTCAAGCAGGGCTATCCCAAGACAAATTGATGGAGAGAAATTCTTCCGGATATGCAGAGCTCATTGAACAATCACCAAAAGGAAAGAGCACTTCTGAACCAAATATTGACGAAGAAGCAAGCCTATCGAGAAGGTCTTGTAGCATTAATGATAAAAAAGTTAGTAGAAGCGGAAAGCGGGGTATGGTTCTTCCCTTTCAACCTCTATCCCTCACTTTTGATGAGGTCAGATATTCTGTAGACATGCCTCAGGAGATGAAGAACCAAGGAGTTTTTGAGACTCGTCTTGAACTCTTGAAAGGTGTTAGTGGAGCTTTTAGGCCTGGAGTACTAGCAGCTTTGATGGGTGTCAGTGGTGCTGGGAAGACTACTCTAATGGATGTTCTAGCTGGAAGAAAAACTGGTGGATATATTGAAGGAAACATCACAATATCTGGGTACCCAAAGAGACAAGAAACATTTGCTAGAATATCAGGATATTGTGAACAATTTGATATTCACTCACCTTATGTTACGGTCTATGAATCTTTACTGTATTCTGCATGGCTTCGATTAGCCCCTGATGTTGATTCTTCAACTAGAGAGATGTTCATTGAGGAAGTTATGGAGCTTGTGGAGCTTACTTCATTAAGAGAAGCCCTTGTTGGATTGCCAGGCGAGGCCGGACTTTCAACCGAACAGCGCAAGAGGCTTACAATTGCAGTTGAACTTGTAGCCAACCCTTCAATAATATTCATGGATGAGCCAACCTCTGGTCTTGATGCCAGAGCAGCTGCAATTGTGATGAGAACTGTGAGAAACACTGTGGACACAGGCCGTACAGTAGTTTGCACCATCCACCAACCAAGTATCGATATATTCGATGCCTTTGATGAGCTACTACTTTTAAAAGTGGGAGGAGAGCAGATATATGCTGGTCCATTAGGTCGCCATTGTTCCCATCTAATCCAATACTTTGAGGCTATTCAAGGAGTACCCAAGATCAAAGATGGTTATAATCCTGCAACCTGGATGCTGGAGGTTACATCAGCAGGAACAGAGGCAAATCTCAGGGTCAACTTCACTAATGTGTACAGAAACTCGGAACTATACCGGAGAAACAAACAATTGATCCATGAGCTTAGTAGGCCTCCTCAAGATTCAAAAGATCTGTACTTTGCTAATAAGTATGCACAACCTTTTTTCCCACAACTTACGGCTTGCCTGTGGAAACAGCATATATCATACTGGCGAAACACAGCATATACAGCAGTGAGGCTCATGTTTACAACAATCATTGCTGTATTGTTCGGGATAATTTTTTGGGGCATTGGCTTGAAAAGGAGAAAAGATCAAGACCTTTTCAATGCAATGGGGTCAATGTATGCTGCAGTTACTTTCATTGGAGTACAAAATGCTGCTTCAGTTCAACCCCTAGTAGCTGTTGAGAGAACAGTCTTCTACAGAGAAAGAGCTGCTGGAATGTACTCCGCTTTGGCATATGCTCTTGCACAGATTGTCATCGAGCTTCCCCACATCTTGATTCAGACTGTGGTCTATGGGGTTATAGTATATGCCATGATGGGATTTGAGTGGACAACACGCAAGTTCTTGTGGAATCTCTTCTTCATGTACTTCAGCTTCTTATACTTCACTTTCTATGGCATGATGACCATGGCCATCACTCCCAACCCCCACGTTGCGGGCGTACTGTCAAGCGCATTCTTTGCAATATGGAACCTCTTCTCAGGCTTCGTCATTCCCTTATCAAGAATACCCATATGGTGGAAGTGGTACTATTGGATTTGCCCGGTTGCGTGGACCTTGAATGGATTGATTACAACCCAATACGGAGATGAAAAGGATAAATTAGAGAGCGGCCAAACAGTAGAAGAATTTGTGAGGAGTTACTTCGGATTTAAACATGAATTCTTGGGAGTTGTTGCTGTTGTGGTGGCTGGTTTCTCGGTCGTCTTCGCATTCATGTTCATCTTCGGCATCAAAGCATTGAACTTCCAGAGAAGATGA 4365 0.4245 MEKNEVTRVNSLREITRAESLRKNGSKVWRSNSMEMFSSSAREDDEEALKWAAIERLPTYLRIRRSILTNDEGNAKEIDIKQLGLTERKILLDRLLKLAEQDNEQFLLKLKKRMDRVGLEIPTIEVRFEHINVEAEVYVGSRALPTVFNFYVNVLEEFLNYLHIIPSPKKPLHILQNVSGIIKPQRMTLLLGPPGSGKTTLLLALAGKLSKDLKYSGRVTYNGHGLDEFVPQRTSAYISQDDIHIGEMTVRETLSFSARCQGVGQNYEMLAELLRREKEAKIKPDPDIDAYMKAAALEGQETNVVTDYILKILGLEVCADIMVGDGMIRGISGGQKKRVTTGEMLVGPVRVLFMDEISTGLDSSTTFQIINSIRQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPREKVLDFFESMGFKCPERKGVADFLQEVTSRKDQWQYWARKDEPYSFVTVKDFVEAFQSFHVGHELGEELAKPFDKTKCHPASLSTQKYGVSKKELFRACISREFLLMKRNSFVYIFKLTLLSYLAITTATLFLRTKMHKDTVADGGTYMGALFFAIIVAMFNGISELNMTIMKLPIFYKQRDLHFYPSWAYSLPPWILKIPFSLVEVAIWEAISYYVIGFDPNITRFFKQCLLLLCLNQMASALFRTMAALGRDIVVANTVGSFALLVVMVLGGFVISREDVHKWFLWGYWSSPLMYAQNAIAVNEFLGHSWRKVIAGRNETLGVMVLKARGFFPEAYWYWIGVGALIGYAFLFNFLYTLALQYLSPFRKAQAGLSQDKLMERNSSGYAELIEQSPKGKSTSEPNIDEEASLSRRSCSINDKKVSRSGKRGMVLPFQPLSLTFDEVRYSVDMPQEMKNQGVFETRLELLKGVSGAFRPGVLAALMGVSGAGKTTLMDVLAGRKTGGYIEGNITISGYPKRQETFARISGYCEQFDIHSPYVTVYESLLYSAWLRLAPDVDSSTREMFIEEVMELVELTSLREALVGLPGEAGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKVGGEQIYAGPLGRHCSHLIQYFEAIQGVPKIKDGYNPATWMLEVTSAGTEANLRVNFTNVYRNSELYRRNKQLIHELSRPPQDSKDLYFANKYAQPFFPQLTACLWKQHISYWRNTAYTAVRLMFTTIIAVLFGIIFWGIGLKRRKDQDLFNAMGSMYAAVTFIGVQNAASVQPLVAVERTVFYRERAAGMYSALAYALAQIVIELPHILIQTVVYGVIVYAMMGFEWTTRKFLWNLFFMYFSFLYFTFYGMMTMAITPNPHVAGVLSSAFFAIWNLFSGFVIPLSRIPIWWKWYYWICPVAWTLNGLITTQYGDEKDKLESGQTVEEFVRSYFGFKHEFLGVVAVVVAGFSVVFAFMFIFGIKALNFQRR 1454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0596 1454 Pfam ABC-transporter N-terminal 79 150 IPR029481 -
Lele25g0596 1454 FunFam ABC transporter G family member 40 871 1101 - -
Lele25g0596 1454 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 159 432 IPR003439 GO:0005524
Lele25g0596 1454 Gene3D - 871 1106 IPR027417 -
Lele25g0596 1454 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 857 1109 IPR003439 GO:0005524
Lele25g0596 1454 Pfam ABC-2 type transporter 511 723 IPR013525 GO:0016020|GO:0140359
Lele25g0596 1454 Pfam ABC-2 type transporter 1183 1396 IPR013525 GO:0016020|GO:0140359
Lele25g0596 1454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 432 IPR027417 -
Lele25g0596 1454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 879 1095 IPR027417 -
Lele25g0596 1454 FunFam ABC transporter G family member 34 162 466 - -
Lele25g0596 1454 Pfam ABC transporter 175 357 IPR003439 GO:0005524
Lele25g0596 1454 CDD ABCG_PDR_domain1 162 414 IPR034001 -
Lele25g0596 1454 MobiDBLite consensus disorder prediction 808 828 - -
Lele25g0596 1454 Pfam Plant PDR ABC transporter associated 728 789 IPR013581 -
Lele25g0596 1454 Pfam ABC transporter 885 1037 IPR003439 GO:0005524
Lele25g0596 1454 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 10 1454 - -
Lele25g0596 1454 SMART AAA_5 184 409 IPR003593 -
Lele25g0596 1454 SMART AAA_5 894 1086 IPR003593 -
Lele25g0596 1454 CDD ABCG_PDR_domain2 854 1092 IPR034003 -
Lele25g0596 1454 Pfam ABC-2 type transporter 390 440 IPR043926 GO:0140359
Lele25g0596 1454 Gene3D - 162 466 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0596 Lele-ChrLele25 3800598 3807267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0596 882 1069 Calmodulin-binding Proteins AT2G36910 26.471 3.46e-06 50.1