Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0595 ATGGGATCTTACAAAGAACAAGAACAAGAACAAGCTAAATGTGCTTGGGTTCATGGACCTATCATCATAGGCGCTGGTCCCTCTGGTTTAGCAGTCGCCGGTTGCCTCTCTCAACATGGCGTCCCCTGTGTTATTCTCGAGAAGAGTGACTGTTTAGCTTCTCTATGGAAACACAGAACCTACGACCGTCTCAAGCTTCACCTTCCCAAACACTTTTGTGAACTCCCCTTGATGGGTTTCCCTCCCAATTTCCCCAAGTACCCCACCAAATACCAGTTCGTTTCATACCTTGAGTCCTATGCTTCCCACTTCTCAATTGAACCCCGTTTCAATCAAACCGTCATGACTGCAGAGTTCGACCAAAGTTGCGGCTTTTGGACGGTTCGAACCCAGGATTTTGAATACATTTCCCGGTGGCTTGTGGTTGCCACTGGTGAAAATGCGGAGCCAGTGATTCCTAAGATTTCTGGAATGGAGTCGTTTCATGGACCGGTTGTTCATACTAGTCTTTTCAAGTCTGGTTCTGATTACAAGAACCAGAGGGTTTTGGTCATTGGGTGTGGCAATTCGGGCATGGAAGCAAGCTTGGATCTTTGCAGACACAACGCATTCCCTTCTATGGTCGCTAGGAACACTATACATGTTCTACCTAGGGAGATGTTTGGTTTCTCAACATTCGGAATAGCCATGGCCCTCCTTAAATGGTTCCCTTTAAGATTAGTAGACAAGTTTCTCCTGACGCTCACCAGCTTCATCCTGGGAAACACCGATCGTTATGGTCTCCGACGACCCAAAACAGGGCCCCTTGAACTAAAAAACGCCACCGGAAAAACCCCTGTTCTAGATGTCGGAGCACTATCACATATCAAATCCGGGAAAATTAAGGTGATGCAAGGAGTGAAGGAGATAACGAGAAATAGTGTGAAGTTTGTGGATGGTCAAGAGAGAGAGTTCGATGCTATAATATTAGCAACGGGTTACAGAAGCAACGTGCCTATTTGGCTCAAGGGGTGTGATTTTTTCGCCGAAGATGGAATGCCAAAAAGGCCCTTTCCAGAGAGTTGGAAGGGAGAGAATGGATTGTATACGGTGGGGTTCACCAGAAGAGGTCTGCTGGGATCTGCTTCTGATGCCACCAAGATCGCCCAAGACATCGCTCATCGGTGGAGGACCGTGAAGGACAGCAAGAACTATCGCAATTCCCATATTGTCCTCCTTAGGAAGAGCTCGTAA 1233 0.4728 MGSYKEQEQEQAKCAWVHGPIIIGAGPSGLAVAGCLSQHGVPCVILEKSDCLASLWKHRTYDRLKLHLPKHFCELPLMGFPPNFPKYPTKYQFVSYLESYASHFSIEPRFNQTVMTAEFDQSCGFWTVRTQDFEYISRWLVVATGENAEPVIPKISGMESFHGPVVHTSLFKSGSDYKNQRVLVIGCGNSGMEASLDLCRHNAFPSMVARNTIHVLPREMFGFSTFGIAMALLKWFPLRLVDKFLLTLTSFILGNTDRYGLRRPKTGPLELKNATGKTPVLDVGALSHIKSGKIKVMQGVKEITRNSVKFVDGQEREFDAIILATGYRSNVPIWLKGCDFFAEDGMPKRPFPESWKGENGLYTVGFTRRGLLGSASDATKIAQDIAHRWRTVKDSKNYRNSHIVLLRKSS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0595 410 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 21 391 - -
Lele25g0595 410 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Lele25g0595 410 PRINTS Pyridine nucleotide disulphide reductase class-II signature 177 201 - -
Lele25g0595 410 PRINTS Pyridine nucleotide disulphide reductase class-II signature 19 41 - -
Lele25g0595 410 PRINTS Pyridine nucleotide disulphide reductase class-II signature 138 146 - -
Lele25g0595 410 Gene3D - 19 391 IPR036188 -
Lele25g0595 410 SUPERFAMILY FAD/NAD(P)-binding domain 180 390 IPR036188 -
Lele25g0595 410 SUPERFAMILY FAD/NAD(P)-binding domain 21 211 IPR036188 -
Lele25g0595 410 FunFam Flavin-containing monooxygenase 20 394 - -
Lele25g0595 410 PRINTS FAD-dependent pyridine nucleotide reductase signature 20 39 - -
Lele25g0595 410 PRINTS FAD-dependent pyridine nucleotide reductase signature 181 199 - -
Lele25g0595 410 Pfam Pyridine nucleotide-disulphide oxidoreductase 21 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0595 Lele-ChrLele25 3787538 3789657 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0595 25 3787538 3789657 Lele02g0600 02 3604683 3606951 CCT
Lele25g0595 25 3787538 3789657 Lele04g0618 04 3747195 3749215 CCT
Lele25g0595 25 3787538 3789657 Lele27g1487 27 20909923 20912034 hybridization
Lele25g0595 25 3787538 3789657 Lele28g0596 28 3814586 3816741 hybridization