Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0585 ATGGATGTTCTCTCACCAGAACTATATCTTGAAGGTCCATCCGACACTTGCCTATTGCTGATGGAGCCGGCAGGGCACTTGAACAGTAGTCAGCACGTCATTGACATCTCTGGGAGTATTGATGCTTCAACATCATCAACTTCACCTCACGATAGATATATTAGTAACATAGATGCATCCGAGCATGGAATAGGCCCTACAAGTGCAGGATTCCCTGTTTCTCAGCAATCAGTTCCTCTCTCTAGTGTATCCAATGTATCGAATTCTAGGAATTCTTCATCAATGAGACAGGAGGAATCCCGTCGACTTAGGAATCCGTTGAATTCTGGCTTTTGCATATCAATTGAGCTATTCCTCACTGTAAGCCAGATTGTTGCATCTATTATTGTTTTATCTTTGTCAAGGCATGAGCATCCAAGCGCTCCATTGTTTGCATGGATCGTTGGTTATGCCAGTGGGACCTATCATTCTGTTGCTAGAACCAGGGGACAAGAGGATGATCAGGCTACTGCTGTGTCATCAGTAAGCAATCAAGGTTCATGGTTGATGAATACAAGACTGAAGAGACCAACGGAATACTTCAAATTGGCCTTAGATTGCTATTTTGCCGTGTGGTTTGTTGTTGGCATTGTAGGGGTCTTTGGGGCACAATCGTCTGCTGATGCAGCTCCTAACTTGTATAGGTTAACTATAGTGTTTCTCATCTTTAGCTGTATTGGATATGCTATGCCCTTCCTTCTATGTGCGACAATATGTTGTTTGCAAAAGTTTCAATCACTCACTTTCTTGCGATCAGTTGATATTCTGAAATCAACCAGATTTTGTGGCCTGTGCTCTTATAAGTGGTTGAAGATAAATGCATCATGCCCTCTTTACAAGGGTGAGGTTGGCGAGAGGATCATCAGGCTCCGTACAAGATGCAGGCCAGCGACTGACTTCCTCTTTGCAAGGGTAAGGGTGGTGAGATCGAGAACGCAAGGGGATCATCACTCATCAGGCTTTGTAGAAGATGCAGGCCAACGAGTTGAAATATAG 1035 0.4396 MDVLSPELYLEGPSDTCLLLMEPAGHLNSSQHVIDISGSIDASTSSTSPHDRYISNIDASEHGIGPTSAGFPVSQQSVPLSSVSNVSNSRNSSSMRQEESRRLRNPLNSGFCISIELFLTVSQIVASIIVLSLSRHEHPSAPLFAWIVGYASGTYHSVARTRGQEDDQATAVSSVSNQGSWLMNTRLKRPTEYFKLALDCYFAVWFVVGIVGVFGAQSSADAAPNLYRLTIVFLIFSCIGYAMPFLLCATICCLQKFQSLTFLRSVDILKSTRFCGLCSYKWLKINASCPLYKGEVGERIIRLRTRCRPATDFLFARVRVVRSRTQGDHHSSGFVEDAGQRVEI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0585 344 MobiDBLite consensus disorder prediction 81 101 - -
Lele25g0585 344 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 21 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0585 Lele-ChrLele25 3735379 3738097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0585 90 253 C3H Transcription Factor Family AT1G80400 43.902 1.41e-49 169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0585 25 3735379 3738097 Lele27g1495 27 20962693 20965245 hybridization
Lele25g0585 25 3735379 3738097 Lele28g0587 28 3759745 3763038 hybridization