Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0573 ATGAATGCTCGCCATCATGATTTATGTATTCAAAGGTTTAATCCTTTCCCAACTGACCATGCAACATTATTTTATGATGCGGTTAGTTGTTTAATATCGGTGATAGTTTATTCAAGTTGTGTTTTGTTTGGCAGGTATTTTGAGATAATGCTGAGGAAGAGAACCAGGTCACTCCAGAAGGATCAACACCTCATGGGTCATGTAGCAAACCCAGATGCTAATTCGGACTACTATTCTCAGTCTCAATCACTGGGGAGAAACATCAAAAGCAATTCAATATTTAATGCTTCTCGTGTGTTCGTAGGTCTGGGTCCTAAGGGCTTACTAGATTCTGATTCAGTTAGGAGCCCAAGATCTCCACTTGATGTTAGGGTTCTGTCAAACTTAGGAAACACAGTTAGAACCCCAAGATCATCTCCCCATGAGGGGAATCAAAGGAGCTGGGAATGCAGCAAAGTAGGCCTAAGCATAATAGATTCTTTGGAAGATTGTCCTAAATTTTCTCGGAAAATTCTTCGACCGTCAGAGAGTAAGAATCTTAGTGTCAGTCCAAGAATGAGGGTGAAAATCCCAAATTGTCAAGCCTATACTGATTCTTTTGAGGCATCTAAATCCTTACCCAAGGATTTTTGTAAGCCTCCTTATAGCAAGGGTGGGTCTATTCCTGTCAAGGGTGAATCAAAAGTTCTTTTTGAAATTGGAGAAACCCACCCAGAGATTGAGCCATTTGGGAAAAGTATGTCTTGTTCCTTGGACTTCTGCAGTCCATTGAAAACGCTTTCTGGTTTAACTAATTCGAACGTTGATTCAAACTCTGGGATTACTATGAAAAATATGATTCACCAAATTGGCTCTCCTCCTCATTTTAGCGGAGGAAGCCATAACTCAAGCACCTTATCTCATACAGAATTCAATGCAAAATTTTTATCCATATGCACATCAAATGAATTTGTTGGGTCCTTATCTGCTGGTGAGATTGAACTTTCTGAGGACTACACATGTGTAATTTCCCGTGGTCCTAATCCAAAAACTACTCATATTTTTGGAGATTGCGTCCTGGAAACACATTCTACTGGTTTTGCAAACCATAGTAAGAATCAAGAGGGGGATAATGGAGTGCTGCCCAATGTGGTTAATAGCTTACAAACTACAAACCAATATCCCTCTAGTGACTTTTTGAGTTTCTGTTACCATTGTGACAAGAAACTGGAAGAGGGAAAAGATATTTATATATATAGAGGTGAACAGGCTTTTTGCAGTTCAAGTTGCCGTGCTTTGGAGATCATGATTGACGAGGAACTTGAGAAGAAATCAAATCCATCTTCTGGAAATTCTTCTCCAAAAGCAGAAAATAGTGAGGAACTTCTTCAAACTGGCATTTTCACAGCCACCTAG 1395 0.3964 MNARHHDLCIQRFNPFPTDHATLFYDAVSCLISVIVYSSCVLFGRYFEIMLRKRTRSLQKDQHLMGHVANPDANSDYYSQSQSLGRNIKSNSIFNASRVFVGLGPKGLLDSDSVRSPRSPLDVRVLSNLGNTVRTPRSSPHEGNQRSWECSKVGLSIIDSLEDCPKFSRKILRPSESKNLSVSPRMRVKIPNCQAYTDSFEASKSLPKDFCKPPYSKGGSIPVKGESKVLFEIGETHPEIEPFGKSMSCSLDFCSPLKTLSGLTNSNVDSNSGITMKNMIHQIGSPPHFSGGSHNSSTLSHTEFNAKFLSICTSNEFVGSLSAGEIELSEDYTCVISRGPNPKTTHIFGDCVLETHSTGFANHSKNQEGDNGVLPNVVNSLQTTNQYPSSDFLSFCYHCDKKLEEGKDIYIYRGEQAFCSSSCRALEIMIDEELEKKSNPSSGNSSPKAENSEELLQTGIFTAT 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0573 464 ProSiteProfiles Zinc finger FLZ-type profile. 391 435 IPR007650 -
Lele25g0573 464 MobiDBLite consensus disorder prediction 439 464 - -
Lele25g0573 464 PANTHER FCS-LIKE ZINC FINGER 11 50 463 IPR044585 -
Lele25g0573 464 MobiDBLite consensus disorder prediction 434 464 - -
Lele25g0573 464 Pfam zinc-finger of the FCS-type, C2-C2 385 433 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0573 Lele-ChrLele25 3644981 3646486 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0573 25 3644981 3646486 Lele01g0594 01 3500684 3502659 CCT
Lele25g0573 25 3644981 3646486 Lele02g0583 02 3494369 3495562 CCT
Lele25g0573 25 3644981 3646486 Lele03g0598 03 3523577 3524757 CCT
Lele25g0573 25 3644981 3646486 Lele04g0602 04 3643851 3645039 CCT
Lele25g0573 25 3644981 3646486 Lele27g1508 27 21052461 21059285 hybridization
Lele25g0573 25 3644981 3646486 Lele28g0575 28 3693200 3694555 hybridization