Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0542 ATGGCTGATTCAGTGCATGCTCGCCGCGATGATAAAATTCAGAATTTGATTTCGGCTAAGAAGTCGTTGAAGCTTAGCCTTGAAAAGTCAAAGTCGCTAGGGTTAGCTCTGGACAAGGCCGGGCCCAGATTGGAGGAGATTAGCCAGAGATTGCCTTCCCTTGAATCTGCAGTTCGACCCATTCGTGCTGACAAGGACGCCCTTGCGGCTGTTGGCGGACACATTAATCGAGCAGTTGGCCCTGCAGCTGCCGTGCTCAAGGTTTTTGATGCTGTTCATGGTCTCGAAAAGTCACTCTTATCTGATCCGCGTAATGATCTCCCGGGTTATTTATCAGTGTTGAAGCGCCTCGAAGAGGCGCTGAGGTTCTTGGCAGATAACTGTGGATTGGCAATTCAGTGGTTGGAGGATATAGTGGAGTACTTGGAAGATAATACTGTTGCTGATGAAAGGTATCTGTTAAATTTGAAGAAGTCACTTCAAAAACTTCGTGAATTGCAAAATGACGAGGGAAAGGCTCGGCTGGATGGTGGGCTTTTAGAAGCAGCATTGCAAAAACTGGAAAATGAATTCCGGCAACTATTGACTGAAAACAGTATTCCACTTCCAATGTCACCGTCACCTACGCTTGCTGATCAGGCATGCATTGCTCCCTCACCTTTACCAGTATCTATTATTCACAAGTTGCAAGTGATTCTTAGCAGATTGATTGCTAACGATAGACTTGACAAGTGCATATCAATATATGTTGAAGTCCGTGGTTCAAATGTCAGAGCAAGCTTGCAGGCTCTCAATCTGGATTACCTTGAAATCTCAATTGCTGAATTCAATGATGTGCAGAGCATTGAGGGATATATAGCCCAATGGGGAAAGCATTTAGAGTTTGCAGTGAAGCATTTGTTTGAAGCTGAGTATAAACTTTGTAATGATGTATTTGAGAGGATTGGATTGGATGTTTGGATGGGCTGCTTTTCAAAGATAGCTGCACAGGCCGGTATACTTGCATTTCTTCAATTTGGGAAGACTGTTACAGAGAGTAAGAAAGATCCCATCAAACTTTTAAAACTATTGGACATATTTGCATCTCTGAACAAATTGAGATTGGATTTCAACCGCCTTTTTGGTGGAGCAGCATGTGTTGAAATTCAGAACTTGACTAGGGATCTAATCAAGAGAGTGATTGATGGGGCAGCAGAGATTTTCTGGGAACTCCAGGTCCAGGTAGAGTTACAGAGACAGAATCCCCCTCCTCTTGATGGCAATGTCCCAAGATTGGTGAGTTTCATTACTGATTATTGTAATAAACTCCTAGGGGATGACTATAAGCCAATATTGACCCAAGTCCTTGTCATACACCGGAGTTGGAAGCGCCAGAGCTTTCAGGAGAAACTCCTAGTGAATGAGGTTTTAAACATTCTAAAAGCCGTAGAATTGAATGTGGAGACATGGATCAAGGCTTATGATGATCCTCTGCTATCGAACTTTTTTGCTACGAACAATCACTGGCATCTGTACAAGCACTTGAAAGGAACAAAGCTTGGGGATCTCTCGGGGGATTCTTGGTTGAAAGAACATGAACAGTACAAGGACTATTACTCCACAATTTTCTTGAAAGATAGCTGGGGAAAGCTTCCTGGTCATTTGAGCAGGGAAGGGCTGATCCTGTTCTCAGGAGGCCGTGCTACTGCCCGTGATCTGGTCAAGAAAAGGTTGAAAAAGTTCAATGAAGTTTTTGATGAGATGTATACAAAGCAGTCGAGCTGGGTTATGCCAGAACGAGATCTGAGAGAGAAAACAACCCACCTTATAGTGCAAGCCGTGGTTCCTGTTTACCGGAGTTACATGCAGAATTATGGTCCCTTGGTTGAGCAAGATGCCAGCTCCTCAAAATATGCAAAATACAGTGTGCAGAAGCTGGAGGAAATGCTTTCGTCTCTTTATCAGCCGAAGCCTGTGAGACACGCCAGTTTGAAAGGTCGGCAGTTTAGTGAGAAATTTGGCAATCAAATGGTGGATCTTCGGCGCACGGCCTCTGCAGTTGTGTAA 2046 0.4409 MADSVHARRDDKIQNLISAKKSLKLSLEKSKSLGLALDKAGPRLEEISQRLPSLESAVRPIRADKDALAAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKRLEEALRFLADNCGLAIQWLEDIVEYLEDNTVADERYLLNLKKSLQKLRELQNDEGKARLDGGLLEAALQKLENEFRQLLTENSIPLPMSPSPTLADQACIAPSPLPVSIIHKLQVILSRLIANDRLDKCISIYVEVRGSNVRASLQALNLDYLEISIAEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGAACVEIQNLTRDLIKRVIDGAAEIFWELQVQVELQRQNPPPLDGNVPRLVSFITDYCNKLLGDDYKPILTQVLVIHRSWKRQSFQEKLLVNEVLNILKAVELNVETWIKAYDDPLLSNFFATNNHWHLYKHLKGTKLGDLSGDSWLKEHEQYKDYYSTIFLKDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYTKQSSWVMPERDLREKTTHLIVQAVVPVYRSYMQNYGPLVEQDASSSKYAKYSVQKLEEMLSSLYQPKPVRHASLKGRQFSEKFGNQMVDLRRTASAVV 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0542 681 PANTHER EXOCYST COMPLEX PROTEIN EXO70 82 643 IPR004140 GO:0000145|GO:0006887
Lele25g0542 681 SUPERFAMILY Cullin repeat-like 85 647 IPR016159 -
Lele25g0542 681 Gene3D Exocyst complex component Exo70 133 655 - -
Lele25g0542 681 FunFam Exocyst subunit Exo70 family protein 135 653 - -
Lele25g0542 681 Pfam Exo70 exocyst complex subunit 288 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0542 Lele-ChrLele25 3454492 3456537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0542 1 681 EXO70 exocyst subunit family AT4G31540 74.891 0.0 1066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0542 25 3454492 3456537 Lele27g1534 27 21240741 21242786 hybridization
Lele25g0542 25 3454492 3456537 Lele28g0549 28 3496419 3498464 hybridization