Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0535 ATGTGGTTGCCGAAGAATCAACCGGAGAAGAAGGATGGAGTTCAGGGGATAGTGGCAGTGGCAATAGACAGAGACAAAGGAAGCCAGAATGCACTCAGATGGGCCATTGATCATCTCCTTGTACGAGGATCCACCATAGTTCTTATCCATGTTAAGGTTAAGCCATCTACATTGTCTGCATCGCCTTCTCTTCAAGCCCCAAGGGCTAATGGTGCTGGTGACGAGAGCTCTCTAGTATGCAAAGATCCTGATCCTCAAACCAGAGAAATTTTCCTCCCATATCGTATACAATGCAAGGACGTTATACTGGAAGACGTAGATGTATCGAAAGCTTTAATCGAATATTCTTCACATACAGCAATCGAACACTTGGTTCTTGGTGCGTCAACCAAAAATGGTCTGCTTCGAAGATTCAAGGCAGCAGATATTCCAGGGACTGTGGCTAAAGGGGCACCAGATTTTTGCAATGTGTATGCGGTTGCAAAAGGAAAAATTCATTCAATGAGATCTGCAACTCGTCCTGCTCCAGCCATTTCTCCTCTACGAAACCAGCTTAATCAACCAACCATCAAGTCTGAACACTCAGACCCTGGACCAGGACCAGGAGTGCCTCCAACTAATAGAGGACGTGATAATAGGCGAAGCCTTGATGGACCATATAAATCGCAGGAAGAATCAGAATCCTTTAGGTCACCATTTACTAGGAGAGGTATGAATGGGAAGTCATATGGGGAACTTTCTGTACCGGATACTGACATATCCTTTGTGAGTTCCGGTGGAAGGCCAAGTACAGATCGCGTGTTCCCTTCATTATTTGACACCGCAGATGCTGGATTCTCCAACCCTCGTTTATCATATAGCTCGGAACCAGATAACAATTATAGTTTCGAGGCGGCCTCGCAGTTTGGGAGAAGGTCTGTGGAAATGTCCAGCCCTCCTCCTGAATTCTCATCAAATTCACAGGAAAGTGAGATACTTCCTTCTTCATCAGGCTTGGATGATGCAGAGGCTGAAATGAGGAGACTGAAATTGGAGCTCAAGCAAACAATGGAAATGTACAGCACAGCTTGTAAAGAAGCTCTCTCAGCAAAGCAGAAGGCAATAGAACTTCAGCGATGGAAGTTAGAGGAAGAGAGAAGATTAGAAGAGGCGAGGCTAGCAGAGGAAGCTGCATTAGCAATTGCAGAGAAGGAGAAGGCGAAATCCAAAGCAGCTCTTGAAGCTGCTGAGGCACAAAAGAGAATAGCAGAACTGGAAGCCCAAAAAAGATTGAGTGCAGAAATGAAAGCACTCAGAGAAGCAGAAGAGAAGAAGAAAGCACTAGATGCTTTAGTAAATATAGATTTAAGGTATAGAAAGTACTCCATTGAAGACATTGAATCTGCAACACAGTTCTTCCAAGAGTCACACAAAATTGGAGAAGGTGGTTATGGTCCAGTCTACCATTGCTTTCTGGACCATACACCTGTTGCAGTTAAGGTTCTTCGTCCAGATGCAGCGCAAGGAAGATCACAGTTTCAACGAGAGGTTGAGGTACTGAGTTGCATACGGCATCCAAACATGGTTCTCCTCCTAGGAGCCTGCCCAGAATATGGATGTCTTATAATAACAGCAAGACCGCCAATGGGTTTGACTCATCATGTTGAAAGAGCCATTGAAAAGGGAACATTCAAGGAGATGTTGGATCCAACTGTGCCTGATTGGCCAGAAGAAGAGACCCTGAATCTTGCAAATTTGGCTCTAAAGTGTGCAGAGTTAAGGAGGAAAGATAGGCCAGATCTGGGAAAAGTCATATTACCAGAACTAAACAGAATGAGAATGCTTGCTGAAAGTGCTAATCACCATTCAATTATGAGTGGCTATTTAAGCCCTCCCAATCTGAGCCTAGCTTCAATGCCGGTGGTTCAGGATCATCCCAGTTCCACAGGTTACGCTGGGGAGGGAACAAGAAATAGATCAAGTCCTGCTTGA 1971 0.449 MWLPKNQPEKKDGVQGIVAVAIDRDKGSQNALRWAIDHLLVRGSTIVLIHVKVKPSTLSASPSLQAPRANGAGDESSLVCKDPDPQTREIFLPYRIQCKDVILEDVDVSKALIEYSSHTAIEHLVLGASTKNGLLRRFKAADIPGTVAKGAPDFCNVYAVAKGKIHSMRSATRPAPAISPLRNQLNQPTIKSEHSDPGPGPGVPPTNRGRDNRRSLDGPYKSQEESESFRSPFTRRGMNGKSYGELSVPDTDISFVSSGGRPSTDRVFPSLFDTADAGFSNPRLSYSSEPDNNYSFEAASQFGRRSVEMSSPPPEFSSNSQESEILPSSSGLDDAEAEMRRLKLELKQTMEMYSTACKEALSAKQKAIELQRWKLEEERRLEEARLAEEAALAIAEKEKAKSKAALEAAEAQKRIAELEAQKRLSAEMKALREAEEKKKALDALVNIDLRYRKYSIEDIESATQFFQESHKIGEGGYGPVYHCFLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLIITARPPMGLTHHVERAIEKGTFKEMLDPTVPDWPEEETLNLANLALKCAELRRKDRPDLGKVILPELNRMRMLAESANHHSIMSGYLSPPNLSLASMPVVQDHPSSTGYAGEGTRNRSSPA 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0535 656 Coils Coil 332 352 - -
Lele25g0535 656 MobiDBLite consensus disorder prediction 304 334 - -
Lele25g0535 656 MobiDBLite consensus disorder prediction 60 79 - -
Lele25g0535 656 MobiDBLite consensus disorder prediction 188 246 - -
Lele25g0535 656 ProSiteProfiles Protein kinase domain profile. 466 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0535 656 PANTHER OS02G0152300 PROTEIN 18 535 - -
Lele25g0535 656 Gene3D Phosphorylase Kinase; domain 1 446 537 - -
Lele25g0535 656 MobiDBLite consensus disorder prediction 210 231 - -
Lele25g0535 656 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 438 537 - -
Lele25g0535 656 SUPERFAMILY Protein kinase-like (PK-like) 449 535 IPR011009 -
Lele25g0535 656 Gene3D HUPs 17 160 IPR014729 -
Lele25g0535 656 Pfam Universal stress protein family 18 138 IPR006016 -
Lele25g0535 656 CDD STK_N 17 163 - -
Lele25g0535 656 MobiDBLite consensus disorder prediction 304 328 - -
Lele25g0535 656 Pfam Protein tyrosine and serine/threonine kinase 469 537 IPR001245 GO:0004672|GO:0006468
Lele25g0535 656 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 138 - -
Lele25g0535 656 Coils Coil 358 444 - -
Lele25g0535 656 MobiDBLite consensus disorder prediction 632 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0535 Lele-ChrLele25 3378495 3382079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0535 535 633 Receptor kinase-like Gene Family AT1G78940 60.000 1.96e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele25g0535 Usp 1e-08 CL0039