Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0531 ATGGCTCACCACAGAGCCTATCACGGGCTTCTCGTCTCGCTCATCAGCTTCTTCGTTCTATTCATCTGCTTTGTGCCATGTTTGGGTGATGATCCTCAGGTTCTGATCAAGTTCAAGAGCTTCTTGTCCAATGCCGATGCCTTGTCCAACTGGAACGACTCTGTAAACATCTGTAACTGGAAAGGTGTCAAATGTCGCAAAGGAGGGTTTCACTTGATACTCGACAACATGGGACTGAGTGGCACTATTGATATTGATACCTTGTTGGAATTATCCAACTTGCAGTCCTTTAGCGCGAAGAACAACAGTTTTGAAGGGAACATGCCTGGTTTTAACAGGATTGGGAGGCTGAAGGGGCTGTATTTGTCACATAACAAGTTCTCTGGAGACATTGCTGATAATGCTTTTGAGGGTTTTAAGTATCTGAGCAAGGTGTACTTGGCGGAAAATGAGTTCACGGGTCGTATTCCTAGTTCTCTTGCTGAATTGCCCAACCTTTTGGATTTGGACTTACATTCGAATCGTTTTGAGGGGAAGATACCAGAGTTTCGAACCAAAAATAAGTTCAGAGTTTTCAATGTATCCAACAACTTCCTCCAATGTGAAATCCCAGGAAGCGTAAACAACGGCGATCCCAGCTCATGTAATGGAAACAATCTATGTGGAAAACCTTTGGATAACCCCTGCAAAAAGTCCTCCTCGAGGAAGCGAGACATTCTGATAACTGCTATCGTAGTGGTGGTTGTGATATTATTGGCTTCAATTACAGCAACTTTATTTGTTCTTCGTCGTCGTCGCCGGAGGCGAAGACGTTCTACTTCTAATTCTCAGACCAAAACTACTACGGTTCACCAAGGGCAACATCAAAACAGTGAACCCTTGGTAATTAAGGAGACTACTCCACCGTCACTTGATCAGACAGCTGAATTCAGCAAGGGCGAGAACGGAGATTTGAAATTTGTTAACAAAGACACACAGAGATTTGATCTGCAGGATCTTCTCAGAGCCTCTGCTGAAATTCTGGGCAGTGGTAGTTTTGGATCTACGTATAAAGCTATTGTTCTGAACGGACCCGCCGTGGTGGTGAAGAGATTTAAACACATGAACAATCTCGGGAAAGAAGAGTTCTTTGAGCACATGACAAGACTTGGAAGCTTGAACCATCCTAATCTTCTTCCTCTTGTTGCCTTCCACTACAGAAAAGAAGAGAAGCTTCTGGTTTATGACTGGGCTGAAAATAGCAGCTTGGCCAGTCATCTCCATGGTAGGCGTGGTTCTGGGCTAGATTGGCCAACACGATTGAAGATCATAAAAGGAGTAGCGAGAGGATTAGCTTACCTCTACAGAGAATTCCCAGATCAAAAGCTACCGCATGGGCATCTAAAATCATCGAATGTTCTGCTAGATAAGTCAATGGAGCCTCATTTGACAGAGTACGGACTCGCACCAGTGATGAACAAGAGCCACGCTCAACAGTTTATGGCGGCGTACAAGGCCCCGGAGGTGAACCAATCCGACGGACCCAACCAGAAGACCGACGTGTGGTGTTTGGGGATTCTGATTCTGGAACTTTTGACAGGCAAGTTCCCGGCGAATTACCTGCGACATGGGAAAGGAGCAAACTCGGACTTGGCCACGTGGGTGGACTCGGTGGTGAGAGAAGAGTGGACAGGGGAAGTGTTCGATAAGGATATTCTGGGTACGAGGAATGGTGAGGGAGAGATGCTGAAGCTGTTGAAGATAGGAATGTATTGTTGTGAATGGGACGTGGAGAATAGGTGGGATTGGAAGGAGACGATGGCGAAGATTGATGAATTGAAGGAGAAGGATGGTGAAGAAGATTTCTCTTCTTTTAATAACAGTGAAGCCGATCTTTCCTCCAACTAG 1887 0.4557 MAHHRAYHGLLVSLISFFVLFICFVPCLGDDPQVLIKFKSFLSNADALSNWNDSVNICNWKGVKCRKGGFHLILDNMGLSGTIDIDTLLELSNLQSFSAKNNSFEGNMPGFNRIGRLKGLYLSHNKFSGDIADNAFEGFKYLSKVYLAENEFTGRIPSSLAELPNLLDLDLHSNRFEGKIPEFRTKNKFRVFNVSNNFLQCEIPGSVNNGDPSSCNGNNLCGKPLDNPCKKSSSRKRDILITAIVVVVVILLASITATLFVLRRRRRRRRRSTSNSQTKTTTVHQGQHQNSEPLVIKETTPPSLDQTAEFSKGENGDLKFVNKDTQRFDLQDLLRASAEILGSGSFGSTYKAIVLNGPAVVVKRFKHMNNLGKEEFFEHMTRLGSLNHPNLLPLVAFHYRKEEKLLVYDWAENSSLASHLHGRRGSGLDWPTRLKIIKGVARGLAYLYREFPDQKLPHGHLKSSNVLLDKSMEPHLTEYGLAPVMNKSHAQQFMAAYKAPEVNQSDGPNQKTDVWCLGILILELLTGKFPANYLRHGKGANSDLATWVDSVVREEWTGEVFDKDILGTRNGEGEMLKLLKIGMYCCEWDVENRWDWKETMAKIDELKEKDGEEDFSSFNNSEADLSSN 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0531 628 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 612 - -
Lele25g0531 628 Gene3D Transferase(Phosphotransferase) domain 1 412 625 - -
Lele25g0531 628 SMART serkin_6 335 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0531 628 MobiDBLite consensus disorder prediction 266 293 - -
Lele25g0531 628 Gene3D Ribonuclease Inhibitor 137 231 IPR032675 -
Lele25g0531 628 FunFam Pollen receptor-like kinase 1 411 617 - -
Lele25g0531 628 ProSiteProfiles Protein kinase domain profile. 335 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0531 628 Gene3D Ribonuclease Inhibitor 30 136 IPR032675 -
Lele25g0531 628 SUPERFAMILY Protein kinase-like (PK-like) 339 601 IPR011009 -
Lele25g0531 628 Gene3D Phosphorylase Kinase; domain 1 299 410 - -
Lele25g0531 628 MobiDBLite consensus disorder prediction 609 628 - -
Lele25g0531 628 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Lele25g0531 628 Pfam Leucine rich repeat 116 176 IPR001611 GO:0005515
Lele25g0531 628 Pfam Protein kinase domain 338 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0531 628 FunFam pollen receptor-like kinase 1 305 410 - -
Lele25g0531 628 MobiDBLite consensus disorder prediction 275 293 - -
Lele25g0531 628 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Lele25g0531 628 SUPERFAMILY L domain-like 71 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0531 Lele-ChrLele25 3360954 3363610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0531 10 611 Receptor kinase-like Gene Family AT4G31250 46.178 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele25g0531 Pkinase 3.1e-30 CL0016