Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0502 ATGCACGCCAGTTCGGCGGTTTCATCGTCTATATGTTATCCTCGCATCTTATCTGAAGCTCATTTCGGTGAGTGTCTTTCACTTTGTGAAGTTAATTTGCATTTTGCTTTTTTGACTTGGATGACGTCTACTGACAATTCCTTACTTCACCGAGGACTTATCGCATATCTCTTTTTGTCGGTGCGGACTAGTGGTCCTACTAGGCGTTCTACAAAAGGACAGTGGACTCCTGAAGAGTGTATTCTCACCTCCGTGGATCAAAGTAAAACAAACCAATATTCCGCCGGTTTAAACACATTTTCCCTTTTTGAAATTCTAGAGGATGAAATAATAATTGATTTGGTGAACAAATATGGGCCAAAAAAATGGTCTACTATTGCACAGCACTTACCGGGACGAATTGGTAAGCAATGCCGAGAAAGGTGGCATAATCATCTCAATCCTGCTATAAACAAAGAAGCATGGACCCAAGAAGAGGAGTTGGCTCTAATTCGTGCACATCAAATTTATGGGAACAGATGGGCCGAATTGACGAAGTTCTTGCCTGGAAGGACGGACAATGCTATAAAAAATCACTGGAACAGTTCTGTCAAAAAGAAATTGGATTCTTACTTGGCGTCAGGTTTGCTTATACCTCATGTTGGACATTCAAATCAACTCATGGTTTCTGCATCTTCGAGGTTACTTTGTAGTGGAGATGATAGTAGTCAGAAGGGAATCGGAGAGGAAGTTTCAGAGTGTAGCCAAGAGTCTGCTAGTGCTAGTTGCCTACCGGTTTCCCGAGAAATGACAAGGGTTGTTGTACATGCTAGAGAAGAAACCAAGCCAAATGAATATTCTAGTCTAGGAAAGGAGCAAAGTCCTAGTCAAGCATCGTGTTCAGGGCCATATTATGTATCATTGGATGATGTTACCATATCCAACTCGGACATTGCTCGTGAAGAGGCTTCCTCTTCTCAACTCACTGTGCAAAAATACTCACACGAGCCTGGAAATTCTGCAGGCATGGATAATGGATTCCAATTACATGGTTTACCCAGTATTTCATCATTAGACTTGGGTGAGGAATTATCACTTTTGCAAGGAGATTGTATAGTTTCTGACGAAAACAATGACATTGTGAATGCTCAGTTTCATACTTCAGTGGGGTTAGGTAATGCAACATCTATGGATTCTTCTAAACCAGAGGATATGTTGATATCTGATGAAGAATACTGTAGAATTCTATTCTCAGATGCAATGATTGATGGGACCTTTTCATCTGGAGATCATAGCAAAGGTGTTGATATGGTTTTGTCTGCATGCACTTCAAATCTTTTCCAATCATCTGAGATCCAGATATCTGATGCTGGGCGAACCTCAGCTGCTCTCAAAACTTGTACAACAAGATCTAATAATTTAATAGAATCTTCATGCTGCCAATCTTTCCCAATTGTTCCTTCATCGCTTTCAGTTAATGATGGTAGAGTATCGTACACTGCTGAAGCCGCTCGAATATATGGAGGTGATGATCAGCAATTTGCCTCCAACGCACATGACAGCTTCATTTACCCCAACGACCCATCCATCTCACCTTGCATTGATATTATAGATAGTGCTGAAATGCACGATGGACCCAATATTGTGAATGATGCATTAAGATTGGTCCCTGTAAATAATTTTACTTGTGCATCGGATGCCAATCAAACTTGTAATCCAACGGATGAAAGGGCAGATGTGCAAACAGAACAGGAGGACACAGGATCTCTATGTTATGAACCTCCTCGATTTCCAAGCTTGGATATTCCTTTCTTCAGCTGTGATCTTATACAACATGGAGGAGATATGCAGCAAGATTTCAGTCCGCTGGGTATCCGTCGGCTTATGATGTCTTCAGTGAACAGTCCAACTCCCTTGAGGTTGTGGGACTCGCCTTCTCGTGATGATAGTCCAGATGCTTTGTTGAGAAGTGCTGCAAAAACTTTCACGAGTACACCATCCATTTTAAAGAAGCGACGCCGGGACTTATCACCATTATCAGATAAGAGAATCGAAAAGAAACTTGAGACTGACATGACATCCACGTTGACTACACATTTTTCACATTTGGATGTCATGTTTGATGACAATGAAGCTCAGGCTGCGAATATGCTTCCTCCATCTTCAATTCAGAAAAATAAAAATGGAGCCTCTGATGATGATAAAGAAAATTGCGGGCCAGCTTTGAAAGGAGAAAACGTAGAGGGAAAAAATGAATCTACCATTTTGAGGAGCAAAGAATCAGAAAAAGATACCGGTAATAATAACTCTCACGACGTTAATTCGAGGATGGAGACTGATGTTGAGGCTTCTGCTGCTGCTGAGATTGGGCAACAACCTTCTGGAGTTTTAATTGAACGTGATGTGAATGACTTGCTATTGTATTCTCCAAATCAAATTCGTTTTAGCTTGGATAGAATTCACATTTCAAGTGCTAAAACTCCCAAAAACCTGAACAACAGAAGCTTGGAAGCAGCTCCAAATCAGAATATCGCTCCAAAATCATTTCATGGAGCCCCAGGGGAGAATTCTGGTGATCATACTGGGAATGATGCTGGTTTCGAAACATTCAACATAATTGATACTGAAATATCGATTGAGGTACTTCAAGTTCTGTTGGATGTCTTTCGTCTTAATGCAGATCACGATTTCCCTCTACTAACACTCTTAACATATCGACAGGATTTTGGGTATTTAATGAGCCCGAGGGATAGAAGCTATGATGCAATTGGGTGGATGAAGCAGGTCAAGGAACAAACTGCGGCTGCATATGCCAATGCTCAGGAGATTTTGGAGATTGACACTCCCAAAGCAGAAGATGCTTCTGGAGGTGCTGGGGATGGCGACCACGAAGGAAGAGGTCCTCATAATCAGCCTGGCAATAACTGTCAGGAAGTATGGTTGCAGATGGAGCGACGGGTACTTGACTTTAGTGAATGTGGGACACCAGGAAAGGAGAACAACAAATCTTCAGCTATGACCCTCTCAAGCCCCTCTTCACATTTGTTGAAAGGCTGTAAATAG 3042 0.4175 MHASSAVSSSICYPRILSEAHFGECLSLCEVNLHFAFLTWMTSTDNSLLHRGLIAYLFLSVRTSGPTRRSTKGQWTPEECILTSVDQSKTNQYSAGLNTFSLFEILEDEIIIDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPAINKEAWTQEEELALIRAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLIPHVGHSNQLMVSASSRLLCSGDDSSQKGIGEEVSECSQESASASCLPVSREMTRVVVHAREETKPNEYSSLGKEQSPSQASCSGPYYVSLDDVTISNSDIAREEASSSQLTVQKYSHEPGNSAGMDNGFQLHGLPSISSLDLGEELSLLQGDCIVSDENNDIVNAQFHTSVGLGNATSMDSSKPEDMLISDEEYCRILFSDAMIDGTFSSGDHSKGVDMVLSACTSNLFQSSEIQISDAGRTSAALKTCTTRSNNLIESSCCQSFPIVPSSLSVNDGRVSYTAEAARIYGGDDQQFASNAHDSFIYPNDPSISPCIDIIDSAEMHDGPNIVNDALRLVPVNNFTCASDANQTCNPTDERADVQTEQEDTGSLCYEPPRFPSLDIPFFSCDLIQHGGDMQQDFSPLGIRRLMMSSVNSPTPLRLWDSPSRDDSPDALLRSAAKTFTSTPSILKKRRRDLSPLSDKRIEKKLETDMTSTLTTHFSHLDVMFDDNEAQAANMLPPSSIQKNKNGASDDDKENCGPALKGENVEGKNESTILRSKESEKDTGNNNSHDVNSRMETDVEASAAAEIGQQPSGVLIERDVNDLLLYSPNQIRFSLDRIHISSAKTPKNLNNRSLEAAPNQNIAPKSFHGAPGENSGDHTGNDAGFETFNIIDTEISIEVLQVLLDVFRLNADHDFPLLTLLTYRQDFGYLMSPRDRSYDAIGWMKQVKEQTAAAYANAQEILEIDTPKAEDASGGAGDGDHEGRGPHNQPGNNCQEVWLQMERRVLDFSECGTPGKENNKSSAMTLSSPSSHLLKGCK 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0502 1013 SUPERFAMILY Homeodomain-like 126 202 IPR009057 -
Lele25g0502 1013 Pfam Myb-like DNA-binding domain 107 161 - -
Lele25g0502 1013 MobiDBLite consensus disorder prediction 272 293 - -
Lele25g0502 1013 Gene3D - 71 152 - -
Lele25g0502 1013 SMART sant 151 199 IPR001005 -
Lele25g0502 1013 SMART sant 99 148 IPR001005 -
Lele25g0502 1013 FunFam Transcriptional activator Myb isoform A 103 152 - -
Lele25g0502 1013 MobiDBLite consensus disorder prediction 944 968 - -
Lele25g0502 1013 MobiDBLite consensus disorder prediction 712 767 - -
Lele25g0502 1013 ProSiteProfiles Myb-like domain profile. 147 197 IPR001005 -
Lele25g0502 1013 MobiDBLite consensus disorder prediction 984 1013 - -
Lele25g0502 1013 CDD SANT 154 194 IPR001005 -
Lele25g0502 1013 FunFam Transcription factor MYB3R-2 153 219 - -
Lele25g0502 1013 PANTHER MYB PROTEIN-RELATED 72 269 - -
Lele25g0502 1013 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 150 IPR017930 -
Lele25g0502 1013 ProSiteProfiles Myb-like domain profile. 107 146 IPR001005 -
Lele25g0502 1013 CDD SANT 107 146 IPR001005 -
Lele25g0502 1013 MobiDBLite consensus disorder prediction 989 1007 - -
Lele25g0502 1013 Gene3D - 153 209 - -
Lele25g0502 1013 MobiDBLite consensus disorder prediction 836 856 - -
Lele25g0502 1013 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 151 201 IPR017930 -
Lele25g0502 1013 MobiDBLite consensus disorder prediction 743 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0502 Lele-ChrLele25 3163821 3169531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0502 62 1013 MYB Transcription Factor Family AT4G32730 38.883 3.10e-173 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele25g0502 Myb_DNA-bind_6 6.6e-15 CL0123